Detail information of GWHGAAEX010516/evm.TU.scaffold_3.182


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218780542|ref|YP_002431860.1|9.00E-26serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
KOGKOG11874.00E-158Serine/threonine protein kinase
nrgi|743833532|ref|XP_010935290.1|0PREDICTED: probable serine/threonine-protein kinase NAK [Elaeis guineensis]
Swissprottr|P27450|CX32_ARATH7.00E-153Probable serine/threonine-protein kinase Cx32, chloroplastic (Precursor)
trEMBLtr|M0SL59|M0SL59_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P04920_001}
TAIRAT2G172204.00E-158Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000021212290412129124+
Transcript Sequence

Network for GWHGAAEX010516

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase843611.40E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.140
SRR2545915Juvenile tuber20.800
SRP108465SRR5643513five period of Gastrodia elata15.520
SRR5643514five period of Gastrodia elata15.870
SRR5643515five period of Gastrodia elata10.880
SRR5643524five period of Gastrodia elata12.720
SRR5643525five period of Gastrodia elata10.840
SRR5643528five period of Gastrodia elata10.280
SRR5643658five period of Gastrodia elata11.640
SRR5643659five period of Gastrodia elata14.290
SRR5643660five period of Gastrodia elata18.640
SRR5643661five period of Gastrodia elata15.840
SRR5643662five period of Gastrodia elata16.600
SRR5643663five period of Gastrodia elata19.710
SRR5643664five period of Gastrodia elata19.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.020
SRR6049655Rhizomagastrodiae_C368-T10_good_118.460
SRR6049656Rhizomagastrodiae_C368-T07_good_118.890
SRR6049657Rhizomagastrodiae_C368-T07_good_126.150
SRR6049658Rhizomagastrodiae_C368-T04_good_120.970
SRR6049659Rhizomagastrodiae_C368-T04_good_125.200
SRR6049660Rhizomagastrodiae_C368-T01_good_120.670
SRR6049661Rhizomagastrodiae_C368-T04_good_118.980
SRR6049662Rhizomagastrodiae_C368-T01_good_116.570
SRR6049663Rhizomagastrodiae_C368-T01_good_115.330
SRR6049664Rhizomagastrodiae_C368-T10_good_115.790
SRR6049665Rhizomagastrodiae_C368-T10_good_115.790
SRP279888GastroGastrodia elata tuber 25.61
JuvenJuvenile tuber45.58
Mother_GastroMother tuber of Gastrodia elata 11.69
Mother_JuvenMother tuber of Juvenile 22.60