Detail information of GWHGAAEX010521/evm.TU.scaffold_3.190
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0411 | 3.00E-79 | Uncharacterized membrane protein |
| nr | gi|672115370|ref|XP_008780594.1| | 0 | PREDICTED: uncharacterized protein At4g17910 isoform X2 [Phoenix dactylifera] |
| Swissprot | tr|B3H6K1|Y4791_ARATH | 3.00E-129 | Uncharacterized protein At4g17910 (Precursor) |
| trEMBL | tr|M0T5X0|M0T5X0_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P10710_001} |
| TAIR | AT4G17910_3 | 3.00E-79 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000002 | 12535192 | 12586141 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010521
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF06423.11 | GWT1 | 305 | 431 | 1.50E-28 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05283 | PIGW | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006506 | Biological Process | GPI anchor biosynthetic process |
| GO:0016746 | Molecular Function | transferase activity, transferring acyl groups |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 16.440 |
| SRR2545915 | Juvenile tuber | 15.090 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.950 |
| SRR5643514 | five period of Gastrodia elata | 14.260 | |
| SRR5643515 | five period of Gastrodia elata | 13.230 | |
| SRR5643524 | five period of Gastrodia elata | 17.710 | |
| SRR5643525 | five period of Gastrodia elata | 14.110 | |
| SRR5643528 | five period of Gastrodia elata | 9.440 | |
| SRR5643658 | five period of Gastrodia elata | 11.920 | |
| SRR5643659 | five period of Gastrodia elata | 10.070 | |
| SRR5643660 | five period of Gastrodia elata | 12.450 | |
| SRR5643661 | five period of Gastrodia elata | 11.280 | |
| SRR5643662 | five period of Gastrodia elata | 7.580 | |
| SRR5643663 | five period of Gastrodia elata | 8.760 | |
| SRR5643664 | five period of Gastrodia elata | 6.700 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 15.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.660 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.390 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.460 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.940 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.820 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.940 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.78 |
| Juven | Juvenile tuber | 13.25 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.75 | |
| Mother_Juven | Mother tuber of Juvenile | 12.74 |