Detail information of GWHGAAEX010522/evm.TU.scaffold_3.193


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|449088034|ref|YP_007420475.1|3.00E-167Catalase [Bacillus thuringiensis serovar kurstaki str. HD73]
KOGKOG00470Catalase
nrgi|743775712|ref|XP_010918244.1|0PREDICTED: catalase isozyme 1 [Elaeis guineensis]
Swissprottr|P17598|CATA1_GOSHI0Catalase isozyme 1
trEMBLtr|Q9SDS9|Q9SDS9_ZANAE0Catalase {ECO:0000256|RuleBase:RU000498}
TAIRAT4G350900catalase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000021270455212735239-
Transcript Sequence

Network for GWHGAAEX010522

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00199.18Catalase784571.00E-172
PF06628.11Catalase-rel4835466.50E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03781katE, CAT, catB, srpA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Tryptophan metabolismmap00380
MAPK signaling pathway - plantmap04016
MAPK signaling pathway - yeastmap04011
FoxO signaling pathwaymap04068
Peroxisomemap04146
Longevity regulating pathwaymap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName
GO:0006979Biological Processresponse to oxidative stress
GO:0055114Biological Processoxidation-reduction process
GO:0004096Molecular Functioncatalase activity
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms79.300
SRR2545915Juvenile tuber27.020
SRP108465SRR5643513five period of Gastrodia elata71.720
SRR5643514five period of Gastrodia elata69.260
SRR5643515five period of Gastrodia elata52.370
SRR5643524five period of Gastrodia elata51.920
SRR5643525five period of Gastrodia elata33.520
SRR5643528five period of Gastrodia elata33.370
SRR5643658five period of Gastrodia elata28.830
SRR5643659five period of Gastrodia elata28.750
SRR5643660five period of Gastrodia elata47.070
SRR5643661five period of Gastrodia elata38.100
SRR5643662five period of Gastrodia elata55.930
SRR5643663five period of Gastrodia elata32.230
SRR5643664five period of Gastrodia elata65.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_173.200
SRR6049655Rhizomagastrodiae_C368-T10_good_199.750
SRR6049656Rhizomagastrodiae_C368-T07_good_167.420
SRR6049657Rhizomagastrodiae_C368-T07_good_170.720
SRR6049658Rhizomagastrodiae_C368-T04_good_172.050
SRR6049659Rhizomagastrodiae_C368-T04_good_180.770
SRR6049660Rhizomagastrodiae_C368-T01_good_169.120
SRR6049661Rhizomagastrodiae_C368-T04_good_173.490
SRR6049662Rhizomagastrodiae_C368-T01_good_151.190
SRR6049663Rhizomagastrodiae_C368-T01_good_161.620
SRR6049664Rhizomagastrodiae_C368-T10_good_184.000
SRR6049665Rhizomagastrodiae_C368-T10_good_184.000
SRP279888GastroGastrodia elata tuber 101.08
JuvenJuvenile tuber91.03
Mother_GastroMother tuber of Gastrodia elata 55.28
Mother_JuvenMother tuber of Juvenile 61.94