Detail information of GWHGAAEX010527/evm.TU.scaffold_3.202


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28231.00E-62Cellular protein (glioma tumor suppressor candidate region gene 2)
nrgi|743768169|ref|XP_010914361.1|1.46E-157PREDICTED: uncharacterized protein At2g40430 [Elaeis guineensis]
Swissprottr|O22892|GSR2_ARATH1.00E-62Uncharacterized protein At2g40430
trEMBLtr|M0SH93|M0SH93_MUSAM6.00E-152Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P23770_001}
TAIRAT2G404301.00E-62Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000021318359713212635+
Transcript Sequence

Network for GWHGAAEX010527

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07767.10Nop5381112.90E-17
PF07767.10Nop531033233.10E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms90.130
SRR2545915Juvenile tuber88.070
SRP108465SRR5643513five period of Gastrodia elata66.490
SRR5643514five period of Gastrodia elata54.440
SRR5643515five period of Gastrodia elata52.900
SRR5643524five period of Gastrodia elata53.650
SRR5643525five period of Gastrodia elata50.760
SRR5643528five period of Gastrodia elata45.960
SRR5643658five period of Gastrodia elata49.700
SRR5643659five period of Gastrodia elata58.510
SRR5643660five period of Gastrodia elata64.840
SRR5643661five period of Gastrodia elata57.290
SRR5643662five period of Gastrodia elata59.210
SRR5643663five period of Gastrodia elata59.380
SRR5643664five period of Gastrodia elata68.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.320
SRR6049655Rhizomagastrodiae_C368-T10_good_157.070
SRR6049656Rhizomagastrodiae_C368-T07_good_162.890
SRR6049657Rhizomagastrodiae_C368-T07_good_188.050
SRR6049658Rhizomagastrodiae_C368-T04_good_196.930
SRR6049659Rhizomagastrodiae_C368-T04_good_1114.530
SRR6049660Rhizomagastrodiae_C368-T01_good_187.620
SRR6049661Rhizomagastrodiae_C368-T04_good_178.910
SRR6049662Rhizomagastrodiae_C368-T01_good_151.970
SRR6049663Rhizomagastrodiae_C368-T01_good_168.940
SRR6049664Rhizomagastrodiae_C368-T10_good_147.270
SRR6049665Rhizomagastrodiae_C368-T10_good_147.270
SRP279888GastroGastrodia elata tuber 67.78
JuvenJuvenile tuber76.04
Mother_GastroMother tuber of Gastrodia elata 31.78
Mother_JuvenMother tuber of Juvenile 50.89