Gene detail

Detail information of GWHGAAEX010545/evm.TU.scaffold_30.5

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|313116936\|ref\|YP_004038060.1\|	9.00E-34	cytochrome P450 [Halogeometricum borinquense DSM 11551]
KOG	KOG0156	1.00E-125	Cytochrome P450 CYP2 subfamily
nr	gi\|672202891\|ref\|XP_008778500.1\|	0	PREDICTED: premnaspirodiene oxygenase-like [Phoenix dactylifera]
Swissprot	tr\|A6YIH8\|C7D55_HYOMU	5.00E-170	Premnaspirodiene oxygenase
trEMBL	tr\|A0A072UW16\|A0A072UW16_MEDTR	2.00E-170	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:KEH34014.1}
TAIR	AT3G26300	1.00E-125	cytochrome P450, family 71, subfamily B, polypeptide 34

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000033	330380	332496	+

Transcript Sequence
>GWHTAAEX010545 ATGGAGACAACAATGATGTCTTTCATGCTACTCTTCTTCTCTGTACTCTTTGTTCTTTCATTAAAGAAGATTAGGAATTCAAAAGCTTTCCACGCCATTAGGCTCCCTCCAGGCCCATCAAAACTCCCATTCATAGGAAGTTTGCATCATGTTTTCGGAGAACATCCACACCAGAGATTAAGAAGCCTTGCAAACAAATACGGGCCTTTGCTTCACCTCAAACTTGGAGAGGTAAATTATTTTATCATTACATCACCAGAATATGCTAGAGAAGTCATGAAGACCCATGACATCGATTTTGCTTCACGACCAGAATCTCTTGCCTCAAAAATACTTTTCTACGATAGCAAAGATATTGTTTTTTCGCCATATGGCAAATATTGGTCACAACTCCGAAAGATATGTGCAGTTGAATTGCTTAGCAGCAAGCGCGTCGAGTCTTTTGGCTTCATAAGGGAAGAAGCAGGAGCAGATATTGTGGAAAAAATTCGTCAGGCGAAGGGATCTCCTGTGAACATCAGTGAAATATTTCTATCTTTAACAAACATGGCAATTTCAAAGGCAGCATTTGGGAAGGTGTACTCACACCATAAAAGATTTAATAATGCCATGAAAGAGGCACTACAATATTTGTCAGGATTTAATTTGGTTGATTTTTATCCATCACTGAGTTTTCTTAGTGATTTAACCGGCACTAGAGCTCAGTTGGAGAGCTTGCATCAACAAATGGATGAGATCTTGGATGAGATATTTGAGGATCATCCTGCTAAGAATCTTAATGAAAATTGTAGTGAGGAGAATATTCTTGATATTTTGTTAAGACTCAAAAACGATGGAGAGATGGATATTTCACTTACAACTGAAAATATCAAAGCTGTAATTTTGGATTTATTTATAGGAGGAACCGATACTGGAGCTTCAACAATGGATTGGGCTATGTCAAAGCTCATTCGGCATCCTGATATTTTGCAAAAGGTTCAATTGAAAGTCAGGAAAGCTTTTGAAGGAAAAGAAAAGATTGAGATGAGAGAGGTCGACAAGCTCCCATATTTAAATCAAATTATTAAAGAAACCTCAAGATTGCACCCTATAGTTCCTTTCTTGGTTCCTAGGATTTGTCGTAACACTGTCAAAATTGAGGATTACACAATACTAGCCGGAATGCGGATTCTAATAAATGCATGGGCAATCATGAGGGACCCAACATATTGGGTTGATCCAGAGAGCTTTCGACCCGAGCGATTTGATGAAGCAACATTCGATTTTAAGGGGTCCAAATTTGAGTATATTCCTTTTGGTGCTGGAAGAAGAATGTGTCCGGGCATAGCATTTGCGATAGCAGAAATAGAGTATTGGCTTGCACAATTGCTTTTTCACTTTGATTGGATGCTCCCTGATGGCAAGATGCCTGAAGAATTAGATATGGATGAAGTTTTTGGTATAACACTTTCAAGAAAAAATGACTTGTTACTTATTGCCACTCCGCATAAACATGCCCCTCAAATTAAATAAGTTAAGTTCTGCTGATGATGAAAATATTACTAAGAACTTTTATGAGAAGAGAAATGGTATCCTTTTATTCCTATTTAATAATTTGTCTATTTGACTCTATATGTTTTATAGGAGAATTTCTATTAATACTTTTTTTCCTTTCGTTGCTTTCTTAAGAATATTCCTATAATTAGGTATTCATTATTGCATAGAGTAGATTGTAACTCAACTATCAAAATCTCACTCAATTTTGAGTTAGTATTTCTCACATTTGAGAGGTAAGTTTTAGAA

Network for GWHGAAEX010545

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	36	487	2.40E-103

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B34

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.390
SRP064423	SRR2545915	Juvenile tuber	0.340
SRP108465	SRR5643513	five period of Gastrodia elata	1.390
	SRR5643514	five period of Gastrodia elata	4.730
	SRR5643515	five period of Gastrodia elata	1.380
	SRR5643524	five period of Gastrodia elata	1.980
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.290
	SRR5643660	five period of Gastrodia elata	0.200
	SRR5643661	five period of Gastrodia elata	0.040
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.740
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.210
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	21.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.450
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.940
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.380
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	19.41
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	5.56