Gene detail

Detail information of GWHGAAEX010548/evm.TU.scaffold_30.10

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|159900690\|ref\|YP_001546937.1\|	2.00E-29	cytochrome P450 [Herpetosiphon aurantiacus DSM 785]
KOG	KOG0156	5.00E-62	Cytochrome P450 CYP2 subfamily
nr	gi\|296089886\|emb\|CBI39705.3\|	9.01E-128	unnamed protein product [Vitis vinifera]
Swissprot	tr\|E3W9C4\|C71A1_ZINZE	2.00E-80	Alpha-humulene 10-hydroxylase
trEMBL	tr\|A0A068UI23\|A0A068UI23_COFCA	4.00E-116	Coffea canephora
trEMBL	tr\|A0A068UI23\|A0A068UI23_COFCA	4.00E-50	Coffea canephora
TAIR	AT5G57260	5.00E-62	cytochrome P450, family 71, subfamily B, polypeptide 10

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000033	475150	528181	-

Transcript Sequence
>GWHTAAEX010548 ATGACCCATGACATCAATTTTGCTTCGCGACCAGAATTAGTTGCCACCAAAATCATTCTCTATGATAGCACTGATATTGGCTTTTTACCATATGGTAAATATTGGTCACATCTTAGAAAGATATGTACCACGGAATTACTTAGTAGCAAGTGCGTTGAGTCTTTTGGTTTCATTAGAGAGGAAGTAGGAGAGAATATTGTGGAAAAAATTCACATGTGTGCACAACACTTGGATAAGATCTTAAATGAGATATTTGATGATTATCACGCTAAGAACCTTAATAGAGATATTTTGTTCAAACTCAAAAATCATGGGGAGTTGAATATTTCACTTACAACTAAAAATACTAAAGCGGTTATACTGGATATATTTATGGGAGGAATTGATACAACAACTTCGACAATGGAGTGGGCTATGTCAGAGCTCATTCGACATCCTGATATTATGCAAAAGGTTCAATCGGAAGTAAAAAAAGTTTTCAAAGGAAAACAAAAGTTTGAAATGAGAGAGGTTAGCAAGCTATCATGCTTGACTCAAATTGTTAAAGAAACCTTGAGATTGCACCGGATAGTTCCTTTCTTAATTCCAAGAATATCTCACATGGAGACAACAATGATGTCTTTCATGCTACTCTTCTTCTCTGTACTCTTTGTTCTTTCATTAAAGAAGATTAGGAATTCAAAAGCTTTCCACGCCATTAGGCTCCCTCCAGGCCCATCAAAACTCCCATTCATAGGAAGTTTGCATCATGTTTTCGGAGAACATCCACACCAGAGATTAAGAAGCCTTGCAAACAAATACGGGCCTTTGCTTCACCTCAAACTTGGAGAGGTAAATTATTTTATCATTACATCACCAGAATATGCTAGAGAAGTCATGAAGACCCATGACATCGATTTTGCTTCACGACCAGAATCTCTTGCCTCAAAAATACTTTTCTACGATAGCAAAGATATTTTGGAGAGCTTGCATCAACAAATGGATGAGATCTTGGATGAGATATTTGAGGATCATCCTGCTAAGAATCTTAATGAAAATTGTAGTGAGGAGAATATTCTTGATATTTTGTTAAGACTCAAAAACGATGGAGAGATGGATATTTCACTTACAACTGAAAATATCAAAGCTGTAATTTTGGATTTATTTATAGGAGGAACCGATACTGGAGCTTCAACAATGGATTGGGCTATGTCAGAGCTCATTCGGCATCCTGATATTTTGCAAAAGGTTCAATTGGAAGTGAGGAAAGCTTTTGAAGGAAAAGAAAAGATTGAGATGAGAGAGGTCGTCAAGCTCCCATATTTAAATCAAATTATTAAAGAAACCTCAAGATTGCACCCTATAGTTCCTTTCTTGGTTCCTAGGATTTGTCGTAACACTGTCAAAATTGAGGATTACACAATACTAGCCGGAATGCGGATTCTAATAAATGCATGGGCAATCATGAGGGACCCAACATATTGGGTTGATCCAGAGAGCTTTCGACCCGAGCGATTTGATGAAGCAACATTCGATTTTAAGGGGTCCAAATTTGAGTATATTCCTTTTGGTGCTGGAAGAAGAATGTGTCCGGGCATAGCATTTGCGATAGCAGGAATAGAGTATTGGCTTGCACAATTGCTTTTTCACTTTGATTGGATGCTCCCTGATGGCAAGATGCCTGAAGAATTAGATATGGATGAAGTTTTTGGCAACTCAAGTGATCTCGAGAACCCGGGATTGGCTTTAGCATATCGTGCGAATTGCTCAGAGACTGAAGAACCCCCGAGGTTCGGCGTAGGGAAAAAGAAGAAGCTCTGCCTGGGTTGGATCGGGGTGACTCGACCCGGGTCCCGACTAGCGGGCGCATCTGATAGCGTGTGGGGCCTGACTTATGTGTTGTCATGCCTTTTGTTCCGCCATGTAAAAAGCGTGGGGCCCACTGCGCTTAAATAGGCGCGATTTTGGTTGCGGGTCCCATAG

Network for GWHGAAEX010548

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	76	204	1.60E-28
PF00067.21	p450	236	307	1.20E-11
PF00067.21	p450	317	560	4.70E-71

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B20

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.510
SRP064423	SRR2545915	Juvenile tuber	0.260
SRP108465	SRR5643513	five period of Gastrodia elata	1.050
	SRR5643514	five period of Gastrodia elata	3.750
	SRR5643515	five period of Gastrodia elata	0.980
	SRR5643524	five period of Gastrodia elata	1.740
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.130
	SRR5643660	five period of Gastrodia elata	0.140
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.490
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.170
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.430
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	11.66
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	3.61