Detail information of GWHGAAEX010549/evm.TU.scaffold_30.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743796330|ref|XP_010924700.1|0PREDICTED: MACPF domain-containing protein CAD1-like [Elaeis guineensis]
Swissprottr|Q9C7N2|CAD1_ARATH0MACPF domain-containing protein CAD1
trEMBLtr|M0TXS7|M0TXS7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P05680_001}
TAIRAT1G296900MAC/Perforin domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000033773505825982+
Transcript Sequence

Network for GWHGAAEX010549

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01823.18MACPF1143158.10E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.020
SRR2545915Juvenile tuber14.130
SRP108465SRR5643513five period of Gastrodia elata14.210
SRR5643514five period of Gastrodia elata12.620
SRR5643515five period of Gastrodia elata14.620
SRR5643524five period of Gastrodia elata13.410
SRR5643525five period of Gastrodia elata16.350
SRR5643528five period of Gastrodia elata28.240
SRR5643658five period of Gastrodia elata18.980
SRR5643659five period of Gastrodia elata12.110
SRR5643660five period of Gastrodia elata11.530
SRR5643661five period of Gastrodia elata11.120
SRR5643662five period of Gastrodia elata11.090
SRR5643663five period of Gastrodia elata12.320
SRR5643664five period of Gastrodia elata11.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.780
SRR6049655Rhizomagastrodiae_C368-T10_good_118.370
SRR6049656Rhizomagastrodiae_C368-T07_good_114.290
SRR6049657Rhizomagastrodiae_C368-T07_good_111.990
SRR6049658Rhizomagastrodiae_C368-T04_good_112.330
SRR6049659Rhizomagastrodiae_C368-T04_good_113.610
SRR6049660Rhizomagastrodiae_C368-T01_good_112.420
SRR6049661Rhizomagastrodiae_C368-T04_good_113.190
SRR6049662Rhizomagastrodiae_C368-T01_good_113.160
SRR6049663Rhizomagastrodiae_C368-T01_good_112.500
SRR6049664Rhizomagastrodiae_C368-T10_good_118.100
SRR6049665Rhizomagastrodiae_C368-T10_good_118.100
SRP279888GastroGastrodia elata tuber 11.54
JuvenJuvenile tuber11.81
Mother_GastroMother tuber of Gastrodia elata 22.01
Mother_JuvenMother tuber of Juvenile 26.13