Detail information of GWHGAAEX010551/evm.TU.scaffold_30.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407645223|ref|YP_006808982.1|4.00E-13hypothetical protein O3I_020245 [Nocardia brasiliensis ATCC 700358]
nrgi|743755409|ref|XP_010908684.1|0PREDICTED: uncharacterized protein LOC105034979 [Elaeis guineensis]
trEMBLtr|M0TTT0|M0TTT0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P26270_001}
TAIRAT4G330500calmodulin-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000033971196976360+
Transcript Sequence

Network for GWHGAAEX010551

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.950
SRR2545915Juvenile tuber20.930
SRP108465SRR5643513five period of Gastrodia elata23.960
SRR5643514five period of Gastrodia elata23.540
SRR5643515five period of Gastrodia elata104.790
SRR5643524five period of Gastrodia elata35.030
SRR5643525five period of Gastrodia elata15.590
SRR5643528five period of Gastrodia elata79.110
SRR5643658five period of Gastrodia elata11.170
SRR5643659five period of Gastrodia elata53.500
SRR5643660five period of Gastrodia elata10.610
SRR5643661five period of Gastrodia elata28.910
SRR5643662five period of Gastrodia elata49.500
SRR5643663five period of Gastrodia elata20.780
SRR5643664five period of Gastrodia elata45.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.040
SRR6049655Rhizomagastrodiae_C368-T10_good_115.250
SRR6049656Rhizomagastrodiae_C368-T07_good_128.620
SRR6049657Rhizomagastrodiae_C368-T07_good_133.810
SRR6049658Rhizomagastrodiae_C368-T04_good_123.990
SRR6049659Rhizomagastrodiae_C368-T04_good_126.780
SRR6049660Rhizomagastrodiae_C368-T01_good_171.280
SRR6049661Rhizomagastrodiae_C368-T04_good_132.520
SRR6049662Rhizomagastrodiae_C368-T01_good_145.500
SRR6049663Rhizomagastrodiae_C368-T01_good_190.640
SRR6049664Rhizomagastrodiae_C368-T10_good_119.170
SRR6049665Rhizomagastrodiae_C368-T10_good_119.170
SRP279888GastroGastrodia elata tuber 14.82
JuvenJuvenile tuber1.64
Mother_GastroMother tuber of Gastrodia elata 465.57
Mother_JuvenMother tuber of Juvenile 158.81