Detail information of GWHGAAEX010564/evm.TU.scaffold_30.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG48323.00E-90Uncharacterized conserved protein
nrgi|743778141|ref|XP_010919524.1|8.35E-118PREDICTED: spindle and kinetochore-associated protein 1 homolog [Elaeis guineensis]
Swissprottr|Q7XAM0|SKA1_ORYSJ1.00E-99Spindle and kinetochore-associated protein 1 homolog
trEMBLtr|M0SSE9|M0SSE9_MUSAM7.00E-105Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P26870_001}
TAIRAT3G606603.00E-90Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003319515311978814-
Transcript Sequence

Network for GWHGAAEX010564

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07160.11SKA1202701.10E-66
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007059Biological Processchromosome segregation
GO:0051301Biological Processcell division
GO:0008017Molecular Functionmicrotubule binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.920
SRR2545915Juvenile tuber10.230
SRP108465SRR5643513five period of Gastrodia elata5.640
SRR5643514five period of Gastrodia elata4.440
SRR5643515five period of Gastrodia elata5.330
SRR5643524five period of Gastrodia elata5.520
SRR5643525five period of Gastrodia elata4.300
SRR5643528five period of Gastrodia elata4.590
SRR5643658five period of Gastrodia elata3.680
SRR5643659five period of Gastrodia elata5.270
SRR5643660five period of Gastrodia elata7.240
SRR5643661five period of Gastrodia elata8.170
SRR5643662five period of Gastrodia elata5.680
SRR5643663five period of Gastrodia elata5.390
SRR5643664five period of Gastrodia elata4.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.510
SRR6049655Rhizomagastrodiae_C368-T10_good_16.570
SRR6049656Rhizomagastrodiae_C368-T07_good_12.930
SRR6049657Rhizomagastrodiae_C368-T07_good_13.500
SRR6049658Rhizomagastrodiae_C368-T04_good_12.120
SRR6049659Rhizomagastrodiae_C368-T04_good_11.840
SRR6049660Rhizomagastrodiae_C368-T01_good_11.680
SRR6049661Rhizomagastrodiae_C368-T04_good_13.940
SRR6049662Rhizomagastrodiae_C368-T01_good_15.860
SRR6049663Rhizomagastrodiae_C368-T01_good_13.500
SRR6049664Rhizomagastrodiae_C368-T10_good_15.920
SRR6049665Rhizomagastrodiae_C368-T10_good_15.920
SRP279888GastroGastrodia elata tuber 4.27
JuvenJuvenile tuber3.47
Mother_GastroMother tuber of Gastrodia elata 3.61
Mother_JuvenMother tuber of Juvenile 1.74