Detail information of GWHGAAEX010568/evm.TU.scaffold_30.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|225849930|ref|YP_002730164.1|1.00E-19ankyrin domain protein [Persephonella marina EX-H1]
KOGKOG05045.00E-83FOG: Ankyrin repeat
nrgi|743809264|ref|XP_010928560.1|1.80E-100PREDICTED: ankyrin repeat domain-containing protein EMB506, chloroplastic [Elaeis guineensis]
Swissprottr|Q9SQK3|EM506_ARATH2.00E-83Ankyrin repeat domain-containing protein EMB506, chloroplastic (Precursor)
trEMBLtr|A0A061EBD8|A0A061EBD8_THECC3.00E-93Ankyrin repeat family protein {ECO:0000313|EMBL:EOY02305.1}
TAIRAT5G401605.00E-83Ankyrin repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003321389412168932+
Transcript Sequence

Network for GWHGAAEX010568

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12796.6Ank_21842728.40E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.460
SRR2545915Juvenile tuber12.460
SRP108465SRR5643513five period of Gastrodia elata7.870
SRR5643514five period of Gastrodia elata8.140
SRR5643515five period of Gastrodia elata7.940
SRR5643524five period of Gastrodia elata7.990
SRR5643525five period of Gastrodia elata10.850
SRR5643528five period of Gastrodia elata10.630
SRR5643658five period of Gastrodia elata10.290
SRR5643659five period of Gastrodia elata6.540
SRR5643660five period of Gastrodia elata6.180
SRR5643661five period of Gastrodia elata5.770
SRR5643662five period of Gastrodia elata6.760
SRR5643663five period of Gastrodia elata7.650
SRR5643664five period of Gastrodia elata4.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.450
SRR6049655Rhizomagastrodiae_C368-T10_good_19.070
SRR6049656Rhizomagastrodiae_C368-T07_good_16.280
SRR6049657Rhizomagastrodiae_C368-T07_good_18.290
SRR6049658Rhizomagastrodiae_C368-T04_good_16.080
SRR6049659Rhizomagastrodiae_C368-T04_good_16.380
SRR6049660Rhizomagastrodiae_C368-T01_good_14.980
SRR6049661Rhizomagastrodiae_C368-T04_good_16.710
SRR6049662Rhizomagastrodiae_C368-T01_good_17.030
SRR6049663Rhizomagastrodiae_C368-T01_good_15.100
SRR6049664Rhizomagastrodiae_C368-T10_good_16.580
SRR6049665Rhizomagastrodiae_C368-T10_good_16.580
SRP279888GastroGastrodia elata tuber 6.82
JuvenJuvenile tuber6.21
Mother_GastroMother tuber of Gastrodia elata 6.21
Mother_JuvenMother tuber of Juvenile 5.57