Detail information of GWHGAAEX010574/evm.TU.scaffold_30.55
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1187 | 1.00E-27 | Serine/threonine protein kinase |
| nr | gi|672129870|ref|XP_008788452.1| | 4.39E-47 | PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9SXB4|Y1130_ARATH | 2.00E-25 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 (Precursor) |
| trEMBL | tr|M0T424|M0T424_MUSAM | 3.00E-42 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P04260_001} |
| TAIR | AT1G70740 | 1.00E-27 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000033 | 2661516 | 2674388 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010574
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 54 | 126 | 1.70E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.680 |
| SRR2545915 | Juvenile tuber | 6.030 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.820 |
| SRR5643514 | five period of Gastrodia elata | 5.710 | |
| SRR5643515 | five period of Gastrodia elata | 4.720 | |
| SRR5643524 | five period of Gastrodia elata | 5.710 | |
| SRR5643525 | five period of Gastrodia elata | 10.320 | |
| SRR5643528 | five period of Gastrodia elata | 10.420 | |
| SRR5643658 | five period of Gastrodia elata | 4.730 | |
| SRR5643659 | five period of Gastrodia elata | 10.830 | |
| SRR5643660 | five period of Gastrodia elata | 6.940 | |
| SRR5643661 | five period of Gastrodia elata | 7.270 | |
| SRR5643662 | five period of Gastrodia elata | 6.820 | |
| SRR5643663 | five period of Gastrodia elata | 4.590 | |
| SRR5643664 | five period of Gastrodia elata | 5.330 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.430 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.290 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.350 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.670 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.920 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.560 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.840 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.950 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.950 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.37 |
| Juven | Juvenile tuber | 5.28 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.48 | |
| Mother_Juven | Mother tuber of Juvenile | 3.35 |