Detail information of GWHGAAEX010575/evm.TU.scaffold_30.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|239917876|ref|YP_002957434.1|1.00E-06serine/threonine protein kinase [Micrococcus luteus NCTC 2665]
KOGKOG11871.00E-61Serine/threonine protein kinase
nrgi|672129872|ref|XP_008788453.1|4.12E-74PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X2 [Phoenix dactylifera]
Swissprottr|Q9C5S9|CRK6_ARATH3.00E-38Cysteine-rich receptor-like protein kinase 6 (Precursor)
trEMBLtr|M0T424|M0T424_MUSAM2.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P04260_001}
TAIRAT1G707401.00E-61Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003326745222685186+
Transcript Sequence

Network for GWHGAAEX010575

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase13546.10E-09
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.730
SRR2545915Juvenile tuber13.900
SRP108465SRR5643513five period of Gastrodia elata9.610
SRR5643514five period of Gastrodia elata8.690
SRR5643515five period of Gastrodia elata12.270
SRR5643524five period of Gastrodia elata9.530
SRR5643525five period of Gastrodia elata18.280
SRR5643528five period of Gastrodia elata16.090
SRR5643658five period of Gastrodia elata12.720
SRR5643659five period of Gastrodia elata14.940
SRR5643660five period of Gastrodia elata16.110
SRR5643661five period of Gastrodia elata14.930
SRR5643662five period of Gastrodia elata16.820
SRR5643663five period of Gastrodia elata12.940
SRR5643664five period of Gastrodia elata11.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.480
SRR6049655Rhizomagastrodiae_C368-T10_good_117.600
SRR6049656Rhizomagastrodiae_C368-T07_good_117.640
SRR6049657Rhizomagastrodiae_C368-T07_good_110.770
SRR6049658Rhizomagastrodiae_C368-T04_good_120.640
SRR6049659Rhizomagastrodiae_C368-T04_good_114.200
SRR6049660Rhizomagastrodiae_C368-T01_good_115.220
SRR6049661Rhizomagastrodiae_C368-T04_good_18.490
SRR6049662Rhizomagastrodiae_C368-T01_good_113.630
SRR6049663Rhizomagastrodiae_C368-T01_good_114.940
SRR6049664Rhizomagastrodiae_C368-T10_good_113.700
SRR6049665Rhizomagastrodiae_C368-T10_good_113.700
SRP279888GastroGastrodia elata tuber 19.04
JuvenJuvenile tuber19.13
Mother_GastroMother tuber of Gastrodia elata 16.11
Mother_JuvenMother tuber of Juvenile 14.89