Detail information of GWHGAAEX010579/evm.TU.scaffold_30.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83647364|ref|YP_435799.1|1.00E-42FAD/FMN-containing dehydrogenase [Hahella chejuensis KCTC 2396]
KOGKOG47300D-arabinono-1, 4-lactone oxidase
nrgi|590720859|ref|XP_007051445.1|0D-arabinono-1,4-lactone oxidase family protein [Theobroma cacao]
trEMBLtr|A0A061DT84|A0A061DT84_THECC0D-arabinono-1,4-lactone oxidase family protein {ECO:0000313|EMBL:EOX95602.1}
TAIRAT2G467600D-arabinono-1,4-lactone oxidase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003331540923165224-
Transcript Sequence

Network for GWHGAAEX010579

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01565.22FAD_binding_4621948.80E-19
PF04030.13ALO3935257.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00103GULO Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0003885Molecular FunctionD-arabinono-1,4-lactone oxidase activity
GO:0071949Molecular FunctionFAD binding
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.900
SRR2545915Juvenile tuber10.620
SRP108465SRR5643513five period of Gastrodia elata32.770
SRR5643514five period of Gastrodia elata81.170
SRR5643515five period of Gastrodia elata50.260
SRR5643524five period of Gastrodia elata123.730
SRR5643525five period of Gastrodia elata0.970
SRR5643528five period of Gastrodia elata0.970
SRR5643658five period of Gastrodia elata2.440
SRR5643659five period of Gastrodia elata171.390
SRR5643660five period of Gastrodia elata201.760
SRR5643661five period of Gastrodia elata115.620
SRR5643662five period of Gastrodia elata15.000
SRR5643663five period of Gastrodia elata50.190
SRR5643664five period of Gastrodia elata12.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.880
SRR6049655Rhizomagastrodiae_C368-T10_good_11.940
SRR6049656Rhizomagastrodiae_C368-T07_good_19.450
SRR6049657Rhizomagastrodiae_C368-T07_good_118.000
SRR6049658Rhizomagastrodiae_C368-T04_good_19.960
SRR6049659Rhizomagastrodiae_C368-T04_good_16.150
SRR6049660Rhizomagastrodiae_C368-T01_good_135.040
SRR6049661Rhizomagastrodiae_C368-T04_good_110.700
SRR6049662Rhizomagastrodiae_C368-T01_good_1158.670
SRR6049663Rhizomagastrodiae_C368-T01_good_1109.900
SRR6049664Rhizomagastrodiae_C368-T10_good_16.680
SRR6049665Rhizomagastrodiae_C368-T10_good_16.680
SRP279888GastroGastrodia elata tuber 24.94
JuvenJuvenile tuber96.00
Mother_GastroMother tuber of Gastrodia elata 6.52
Mother_JuvenMother tuber of Juvenile 19.45