Detail information of GWHGAAEX010585/evm.TU.scaffold_30.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|154244289|ref|YP_001415247.1|2.00E-20class I peptide chain release factor [Xanthobacter autotrophicus Py2]
KOGKOG34291.00E-50Predicted peptidyl-tRNA hydrolase
nrgi|743882955|ref|XP_010909288.1|2.11E-103PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like isoform X1 [Elaeis guineensis]
trEMBLtr|D7SX50|D7SX50_VITVI3.00E-99Putative uncharacterized protein {ECO:0000313|EMBL:CBI22147.3}
TAIRAT1G628501.00E-50Class I peptide chain release factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003336407483650768-
Transcript Sequence

Network for GWHGAAEX010585

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00472.19RF-1852105.10E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006415Biological Processtranslational termination
GO:0003747Molecular Functiontranslation release factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.640
SRR2545915Juvenile tuber7.290
SRP108465SRR5643513five period of Gastrodia elata8.850
SRR5643514five period of Gastrodia elata14.590
SRR5643515five period of Gastrodia elata12.980
SRR5643524five period of Gastrodia elata12.820
SRR5643525five period of Gastrodia elata10.820
SRR5643528five period of Gastrodia elata12.700
SRR5643658five period of Gastrodia elata11.520
SRR5643659five period of Gastrodia elata8.400
SRR5643660five period of Gastrodia elata9.220
SRR5643661five period of Gastrodia elata7.890
SRR5643662five period of Gastrodia elata8.850
SRR5643663five period of Gastrodia elata9.680
SRR5643664five period of Gastrodia elata8.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.370
SRR6049655Rhizomagastrodiae_C368-T10_good_113.870
SRR6049656Rhizomagastrodiae_C368-T07_good_19.210
SRR6049657Rhizomagastrodiae_C368-T07_good_18.130
SRR6049658Rhizomagastrodiae_C368-T04_good_18.490
SRR6049659Rhizomagastrodiae_C368-T04_good_17.360
SRR6049660Rhizomagastrodiae_C368-T01_good_110.360
SRR6049661Rhizomagastrodiae_C368-T04_good_18.840
SRR6049662Rhizomagastrodiae_C368-T01_good_19.800
SRR6049663Rhizomagastrodiae_C368-T01_good_19.510
SRR6049664Rhizomagastrodiae_C368-T10_good_111.840
SRR6049665Rhizomagastrodiae_C368-T10_good_111.840
SRP279888GastroGastrodia elata tuber 9.60
JuvenJuvenile tuber10.42
Mother_GastroMother tuber of Gastrodia elata 9.32
Mother_JuvenMother tuber of Juvenile 7.98