Detail information of GWHGAAEX010590/evm.TU.scaffold_30.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17970Uncharacterized conserved protein (Neuroblastoma-amplified protein)
nrgi|672174628|ref|XP_008807443.1|0PREDICTED: uncharacterized protein LOC103719812 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9FIN7|MIP2_ARATH0MAG2-interacting protein 2 {ECO:0000303|PubMed:24118572}
trEMBLtr|K3Z324|K3Z324_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si020942m}
TAIRAT5G243500Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003341690984212570+
Transcript Sequence

Network for GWHGAAEX010590

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08314.10Sec3958711827.80E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to ER

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.880
SRR2545915Juvenile tuber49.720
SRP108465SRR5643513five period of Gastrodia elata19.180
SRR5643514five period of Gastrodia elata19.490
SRR5643515five period of Gastrodia elata18.310
SRR5643524five period of Gastrodia elata18.890
SRR5643525five period of Gastrodia elata24.820
SRR5643528five period of Gastrodia elata18.340
SRR5643658five period of Gastrodia elata24.570
SRR5643659five period of Gastrodia elata18.500
SRR5643660five period of Gastrodia elata20.870
SRR5643661five period of Gastrodia elata15.500
SRR5643662five period of Gastrodia elata16.090
SRR5643663five period of Gastrodia elata20.160
SRR5643664five period of Gastrodia elata19.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.300
SRR6049655Rhizomagastrodiae_C368-T10_good_117.300
SRR6049656Rhizomagastrodiae_C368-T07_good_122.820
SRR6049657Rhizomagastrodiae_C368-T07_good_129.890
SRR6049658Rhizomagastrodiae_C368-T04_good_131.890
SRR6049659Rhizomagastrodiae_C368-T04_good_136.230
SRR6049660Rhizomagastrodiae_C368-T01_good_129.260
SRR6049661Rhizomagastrodiae_C368-T04_good_131.390
SRR6049662Rhizomagastrodiae_C368-T01_good_117.950
SRR6049663Rhizomagastrodiae_C368-T01_good_122.880
SRR6049664Rhizomagastrodiae_C368-T10_good_115.920
SRR6049665Rhizomagastrodiae_C368-T10_good_115.920
SRP279888GastroGastrodia elata tuber 29.35
JuvenJuvenile tuber48.61
Mother_GastroMother tuber of Gastrodia elata 28.21
Mother_JuvenMother tuber of Juvenile 53.19