Detail information of GWHGAAEX010607/evm.TU.scaffold_30.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17002.00E-87Regulatory protein MLP and related LIM proteins
nrgi|672140039|ref|XP_008793824.1|1.59E-106PREDICTED: pollen-specific protein SF3-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q94JX5|WLIM1_ARATH7.00E-88LIM domain-containing protein WLIM1 {ECO:0000305}
trEMBLtr|M0U1D2|M0U1D2_MUSAM4.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P18250_001}
TAIRAT1G102002.00E-87GATA type zinc finger transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003356108585625744-
Transcript Sequence

Network for GWHGAAEX010607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00412.21LIM13672.00E-11
PF00412.21LIM1131684.80E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLIM

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms317.650
SRR2545915Juvenile tuber219.380
SRP108465SRR5643513five period of Gastrodia elata85.270
SRR5643514five period of Gastrodia elata81.830
SRR5643515five period of Gastrodia elata72.080
SRR5643524five period of Gastrodia elata74.690
SRR5643525five period of Gastrodia elata137.070
SRR5643528five period of Gastrodia elata128.020
SRR5643658five period of Gastrodia elata145.520
SRR5643659five period of Gastrodia elata119.260
SRR5643660five period of Gastrodia elata147.540
SRR5643661five period of Gastrodia elata142.740
SRR5643662five period of Gastrodia elata155.660
SRR5643663five period of Gastrodia elata185.330
SRR5643664five period of Gastrodia elata206.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_199.090
SRR6049655Rhizomagastrodiae_C368-T10_good_182.950
SRR6049656Rhizomagastrodiae_C368-T07_good_185.170
SRR6049657Rhizomagastrodiae_C368-T07_good_1127.630
SRR6049658Rhizomagastrodiae_C368-T04_good_1129.900
SRR6049659Rhizomagastrodiae_C368-T04_good_1148.740
SRR6049660Rhizomagastrodiae_C368-T01_good_1106.370
SRR6049661Rhizomagastrodiae_C368-T04_good_1111.990
SRR6049662Rhizomagastrodiae_C368-T01_good_165.080
SRR6049663Rhizomagastrodiae_C368-T01_good_178.550
SRR6049664Rhizomagastrodiae_C368-T10_good_167.880
SRR6049665Rhizomagastrodiae_C368-T10_good_167.880
SRP279888GastroGastrodia elata tuber 218.03
JuvenJuvenile tuber138.29
Mother_GastroMother tuber of Gastrodia elata 74.73
Mother_JuvenMother tuber of Juvenile 109.23