Gene detail

Detail information of GWHGAAEX010611/CADD00853.7.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000033	6408424	6414491	-

Transcript Sequence
>GWHTAAEX010611 TCCGTCGTATGGTCGCTAGACACAACTGCTGAACATCCAGCTAGCCAACCTAACACCATTGAAAAGATTGATAGGTGTGATATATTATAAAGATTTGAGTGCAATATACTTCAATTTAAAAGTTTAGATGTGATATAATGTTTAAAGATTTGTGTTAGCGGTAAAAATCCCAATTTAGGGATCTTTGTTATATATAACTAGGGTTAATGGTTTAAGTTGCCCGGCTGCGATCGGTTCGTAGTCTCGCCTTGAAACGAGACATGGAGAGCGTCTCAACACTAACCGCTTCTCTGGGGTTTGATCCTTCCCAGGAAGAGGAGGAGGAAGGAGAGGAAGAACCTGTGTTCGTAATCCAGTCCGAGCAGTCCCATGTCGATGAGCATGACGTCTCTATTTTATCCCTGGTTCCCATCCCGCCTCAGGAAATCCCCGGCTCTCAATGTACTGACAGCCTTTTCCCCGCCGAAAATCCACTGGAGCCGAGACTTGGGCTGGAATTCGAGTCTTCCGATGACGCTAGGAGCTTCTATTCTGCCTATGCCGAGCGATCGGGCTTCCGTGTTCGCAACAGCAAGTCGTTCACCTCGAGAGTGGACGACACTGTGATCATGCGCCGGTTTGTGTGCTCTAAGCAAGGACGGCCTTCCAAGAAGGATCCCTTTGATCTCACCAAGAAGAGGCGCAATCGCATCTCCTCTCGCGAAGGTTGCAAGGCAATGCTTCAGGTCAACCGCAGGGAGAATGACCAGTGGACGATCTCCCGATGCGTGCTCGAGCACTGTCATCCCCTCGGGATCGTTCCTAGTCACTCTCCTTCTCTCCAGAAGAAACCGACCAAGAAGCCATGGGAGGTCCTTCCTAGCACTGCTTCGGAGAAGGGGCTCGGCGTTGGGGGCGGAGTCGCTCAGAGCTTGCTGGAGTATTTCAAAAGGCTGCAGACGGATAATCCGGCATTCTCTTACGCTATCCAGGTGGATAAAAAGAACTGTTTGGCTAACGTGTTTTGGGCCGATGCTAGGGCGAGAACGTCCTACGGCTATTTCGGCGATGCCGTTGTGTTCGATATGAGCTGCAAGAGGAATAAACGCGCGGTGCCTTTTGCTGCCTTCTCCGGAATGAATCATCACAGGCAGCTTATTGTGGTCGGCTGTGCTTTCATGACCGATGAGAGCGAAGCTTCCTTTGTTTGGTTGTTTGAGACTTGGCTTTCTCTGATGAAAGGAAGGTGCCCTGTTTCTTTAGTCACACCGTTTGATGAAGCAATTGGTGCAGCTGCTTCCAAGGTTTTCCCTAACGCCCAGCACCGTTTTTGCAGAAGAGACATCTTTCGGAAATGCAAGGAGATTCTTTCTGATGATTGTGCAGAGTATGCTTCTTTCAAGAGTGAGTTTAAGAAATGCGTTTGTGACTCTGAGAGCAGTGGGGACTTTGAGTTGGGTTGGAGATTGCTTATAGATAGATACGGCTTGGAGGGGAACTCCTGGTTAAGAGCCCTATATGATGCGCGCCAGAGGTGGATTCCGGTGTTTCTGAAATGCACCTTTTGCTTAGATATGCCTGGCGCGTTGAAACATGAAACAATGCACAAGTTCTTCCAAAGGAACTCCATCACAACAACCACATTGCGGGATCTAGTGTCTCAGTTTGATAAAGCCATGGCGGGGCAGTGTGAGAAGGAAATACATGCTGATTTTGCTATGAATCATTCAAAGCCTGTTATGAAAACTCCATCACCGATGGAGAAGCAAGCATCTGATTTATATACGAGAGTGATTTTTGACATATTTCAAGAAGAGCTTATTTCGTCTTCAGGTTTTTCAGCAGATAGAGTTGAGGATGGATTGATTAGCAAGTTCCGTGTGACAATAGCTGAAGATACTACTAATAGTGCGTACCTGGTCATGCATAATGCTTCTGAAAAAACCATAAGCTGCAGCTGCTCTATGTTCGAAACTTCAGGTCTGTTATGCAGGCATGTGCTTAGAGTGTTAATGGTTATTGGTGTTTTTACACTTCCTTCAGAGTACATTTTGAGGCGGTGGACTAGGAATGCCAAGAGTGGTTTTTTTATTTATGACAATTGTGCACAGACACCAAGCAATAGCTACAGAGCATTTGGTTTGCGGTGCAATGATCTGTATCGTGATGCTGTTCGGTTTGCAGATGAAGGGGCTACTTCTGCTGTTATCTACAAAATTTCCAAGGAAGCATTGCAGAATGCTTTCACTGAAGTTTTCAGTGTTAAAAGGGCCCATTTTTCAACAAAATACTGTAAATTTTCATAGATACTCAGGTGTTGATTATTATTATTATTATTTTATTTTATTGCTAATTCAGTGCATGTTCATAAACAAATTAAAGTAGTTTTCTTCTATTCATGAAATTTAAGGCTAACAATTCTATTGTACATTGTTCAATAACCCATTTAGGGACTATGTAGAAAATGTGGAGAGTTGTCTAATATTTTTCCATCTTATAAAATTTTTTGCTTTACCTTGCTTGTTTTACCAAGAATGCTATCTATAATTCAAATATGAATTTGATTTGATTTCTCTTTTATTTTAAGTACTTTTTGATCTATATATTGATTAATTTTATATTTTAATTTTCTTTTTGGTTTTCATTGTGAAATTTTGAAAATACGCCCAATGGAATGCAAAATGTTACCATGCATAGTGAAAACCTTGTATTTTTTGCTTAATACTGTGAGGTAGTGTAACTAAAATTAGGCTTGATAGTTGGTGTCATGAATTTTGGCAAGGGTATTGCGATTTCGTCATACATAGAACAAATATGAGTAAGAAATAAATCGTAGAAATCAGGCACAAATAAACACAACATAGAATACTCGATTTTTTATGTGAAAAACTCATTGCAAGGATGGAGCCACCGTCATGAAAAAAATCATAATGAAATGGAAAAGAATACTAGTAGTTGCCCCTTCCTCACAATGCATACACATACATTTATAGCATTTAAGCGTTTTAATTGAAATTTATTGAGGCACGCCTGGGGGCGCATTTATGCGCGCTTGAGCGCAACACATGTTGGCCGACAATTTGTCAATTTTGTTGTAGTTTGTGTATTGATGCTTCAAGGCAAGCTTGGGCATGTACCTATGTACTTGGGCATGTACCTATGCACCTGGGTGTGTACCGTTATGGTGGACATGCCTAAGTGTTGGTAGAGCTTCATGTGTTTTGCCTCCATCCATTAACTTTGTGAGGAACCTAGGTGTCTCGTTATGCTTAGGTGCTCTTGGATGTTTAGTCTCCTCTGGCACTTGAGCGCGCTTCTGCGGTGTCTCCTCGGATTTGTCCAAACCCTAGTGATAACATGAGCCACCCTAATCACCATTGTCTTGACTTTCTTTGAAGATCGTATCTTCTGCTTGGAGGCTGAGTCTTCCTTGTTTCTCTAACGTATCTCTATAATTTTTCCTCCAACAAAAGGCTACGAGGGGCCCTTTATAGACTTCTTTATCAACATATTAGAAATTATCAAACCCAAAGTATTTATCTTATGGAGTGATAGATCCTCCCCATTCATCTTATAATATCTTAGCTCTTCATGTAGGTGAAGAGATTCAGCCTCTCTAGGCTAAAGGCCTCTAAGGGTAGCCCAATTTTACCACTCTTTCTGATCATGCTAGGCTAACGTCAGCTTAAAGCACGGGACCAACATTTTTCAAGATACTTGCAGATAAATACTTCTTTGTCACCAAATGTCGAATATCTCTCTAACCTTAGCATATTATGATACTAGATTATACCCTAGTCTTTTCTGGGGCATCTTCATAATCTTTATTAGGGCATCATTAGTATGTCCTGAATTTGACCTAATAAATCCTTGAATTGTTTCATACTCATCTCCTCTGGCTGGTCAGTGATCCCAATATTATGACACCTTGGCATAAAAGTACTATAATGTTGTAATATCACCTTTTGACTTTAGGAGTTACAAACATATCCAGTTTAGTTGATGTCCTGTATTTGATGATAACAAAGCATTGAATATTACTTTTGATAATAATGTTCTTTGCTAAATATTTAGGTTTAGCTAAATCATAGATTAGATCCATTATATTAATTACTCAACAAGTTTAGTATCCAGATGTGATCAAGGCTTAGCCATGGAGAAAACCAAGATTATAGCAAAGCCTTGCAGCTTATAAGCAAAAGCTAAAAGTAAGTGATGCCAAAAACTAGACTTATTTAGGGATGGTTTTTGCTCAAGATTTATGTTTTTTGTACTGTGGATGTGAAGGAGCTGCTAAGAGGCTGTGGTGGCTGTGATGGCTTAGAAAGTTGGGAGGTGATATGAGGAAGAAACTTGCTATGTGTGGGACTGAGTGATAAGCTTTGAGCGCTCCATGTGTAAGAGAGTTTGTTTCTTTACTGTAATCTATTTTTTATTCACAGTTAAGCTTTTTTTCTCATCTTTGAGGCTTTTCATGTACCATATGTGCTTCATGTGCTTGTGCATATTTTTCATTTTCTTATATGATGTTTATTTTTAATTTTCTCCAAATGTGACAAAGCCGGTAGATTCTTAGTGCTTCTACAACAAAAAGGGATTAGTGGAATTCCTAATAGTAAGCATTGCCTAATGGAATGAAGTCAAGAAGGCACAAGTTTAAGTTATTTAGAAGCTGAGGTTGATATGACCATCACTTTCAATATTGGCGTTCAGCTACAGATAGTCTTCATCCTTAATTTGCATGATGGAGACATCTCTGATAAAGGATTTTCAGCAATCATCACACAAAGAGTAGCACGACGATTAAGAGCATCTGCTACTACATTAGTTTTTCCTGGATGATACTGAATACTAAGATCATAATCACTGATGAGTTCAAGCTATCTTCACAAACGACAGTTCAACTTGCGTTGGGTGAATATGTACTTTAAGCTTTGATGGTTAGGGAAGATTTTCATTTAACACCATACAAGTAATGGCGCCAAGAAGGTATTCCGGGTTGAGCTCTGAGTCAAAAACTGAAGAGATGAAATGTTACGTTTGTGGAGTTGTGAGTGCAGCCCTAGGTGATGCTCCAAGGATGGGTACAACTAAACACGCAAGCAAAAAGCATTGAAGAGAGCGAGTAACTAAACTAGATGGTGATGCATCGAGCACATTAGAGTGGGCTATAAGACAATTGCAAATATTAGAATGGCTTTGGGTTTCGCCACAATTCAAATAAATTTGAGATGGATGCTGAACATGCCAACACAAGCTAAGGAAAGTTGAACTTTAGAGGACTGGGTGCTTAGCATTAGTTGGGCGTTGGCTGGGCACGAATCTGATGACGCTGAGTGAGGGTTGGTTGAGCATTGGAAGAATTTTAACGTCGAAAGGCCGACACTTTGCGCTCAAGTACCCATGCAATGATCTAGAAGAACCGTCGATTTAGCACACAATGGAATCTTGGACCAAGCACGAATGGTGGAAACAACAAATATGAGGGTCTAACGTTTGGGCATGCCCAAGTACCAGACGTAGTGTGACAACTAATGTATTATGCTAGGAGCCAATTTGGGAGCCAACTAGGCTTCTTTAAGAATGTTTTTTGCTCAAGAAGTTTATTTTTGTAGTGTGGATGTGAAGGAGCTGCTAAGAGGCTGTGGTGGCTGAGGGATTAGGATGTTGCGCGGTGATATGAGGAAGAAACTTGCTATGTGTGGGGGTTGGGTGATAGGCTTTGAGCGCTCTCTGTGTAAGAGAGTTTGTTTTCTCTACTGTAATCTATTTTTTATTCACAATAAAGCTTTTTTTCTCATCTTTGGGGTTTTTCATGTATCATTTGTGCTTCATGTGCTTGTGCATTTTTTTTATTTTCTTCTATGATGCTTATTTTTAAATTTCTCCAATTGTTG

Network for GWHGAAEX010611

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX010611
SVVWSLDTTAEHPASQPNTIEKIDRCDILRFECNILQFKSLDVICLKICVSGKNPNLGIFVIYNGWFKLPGCDRFVVSPNETWRASQHPLLWGLILPRKRRRKERKNLCSSSPSSPMSMSMTSLFYPWFPSRLRKSPALNVLTAFSPPKIHWSRDLGWNSSLPMTLGASILPMPSDRASVFATASRSPREWTTLSCAGLCALSKDGLPRRIPLISPRRGAIASPLAKVARQCFRSTAGRMTSGRSPDACSSTVIPSGSFLVTLLLSRRNRPRSHGRSFLALLRRRGSALGAESLRACWSISKGCRRIIRHSLTLSRWIKRTVWLTCFGPMLGRERPTAISAMPLCSIAARGINARCLLLPSPEIITGSLLWSAVLSPMRAKLPLFGCLRLGFLKEGALFLSHRLMKQLVQLLPRFSLTPSTVFAEETSFGNARRFFLMIVQSMLLSRVSLRNAFVTLRAVGTLSWVGDCLIDTAWRGTPGEPYMMRARGGFRCFNAPFAICLARNMKQCTSSSKGTPSQQPHCGICLSLIKPWRGSVRRKYMLILLIIQSLLKLHHRWRSKHLIYIREFLTYFKKSLFRLQVFQQIELRMDLASSVQLKILLIVRTWSCIMLLKKPAAAALCSKLQVCYAGMCLECWLLVFLHFLQSTFGGGLGMPRVVFLFMTIVHRHQAIATEHLVCGAMICIVMLFGLQMKGLLLLLSTKFPRKHCRMLSLKFSVLKGPIFQQNTVNFHRYSGVDYYYYYFILLLIQCMFINKLKFSSIHEIGQFYCTLFNNPFRDYVENVESCLIFFHLIKFFALPCLFYQECYLFKYEFDLISLLFVLFDLYIDFYILIFFLVFIVKFKYAQWNAKCYHAKPCIFCLILGSVTKIRLDSWCHEFWQGYCDFVIHRTNMSKKIVEIRHKTQHRILDFLCEKLIARMEPPSKKSNGKEYLPLPHNAYTYIYSIAFLKFIEARLGAHLCALERNTCWPTICQFCCSLCIDASRQAWACTYVLGHVPMHLGVYRYGGHAVLVELHVFCLHPLTLGTVSRYAVLLDVSPLALERASAVSPRICPNPSDNMSHPNHHCLDFLRSYLLLGGVFLVSLTYLYNFSSNKRLRGALYRLLYQHIRNYQTQSIYLMEILPIHLIISLFMVKRFSLSRLKASKGSPILPLFLIMLGRQLKARDQHFSRYLQINTSLSPNVEYLSNLSILYIIPSFLGHLHNLYGIISMSIPNKSLNCFILISSGWSVIPILHLGIKVLCCNITFLELQTYPVLMSCIQSIEYYFCSLLNIVLNHRLDPLYLLNKFSIQMSRLSHGENQDYSKALQLISKSKVMPKTRLIGWFLLKIYVFCTVDVKELLRGCGGCDGLESWEVIGRNLLCVGLSDKLALHVESLFLYCNLFFIHSAFFLIFEAFHVPYVLHVLVHIFHFLICLFLIFSKCDKAGRFLVLLQQKGISGIPNSKHCLMESQEGTSLSYLEAEVDMTITFNIGVQLQIVFILNLHDGDISDKGFSAIITQRVARRLRASATTLVFPGYILRSSLMSSSYLHKRQFNLRWVNMYFKLWLGKIFIHHTSNGAKKVFRVELVKNRDEMLRLWSCECSPRCSKDGYNTRKQKALKRASNTRWCIEHIRVGYKTIANIRMALGFATIQINLRWMLNMPTQAKESTLEDWVLSISWALAGHESDDAEGLVEHWKNFNVERPTLCAQVPMQSRRTVDLAHNGILDQARMVETTNMRVRLGMPKYQTCDNCIMLGANLGANASLRMFFAQEVYFCSVDVKELLRGCGGGIRMLRGDMRKKLAMCGGWVIGFERSLCKRVCFLYCNLFFIHNKAFFLIFGVFHVSFVLHVLVHFFYFLLCLFLNFSNC

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.440
SRP064423	SRR2545915	Juvenile tuber	5.890
SRP108465	SRR5643513	five period of Gastrodia elata	4.690
	SRR5643514	five period of Gastrodia elata	4.380
	SRR5643515	five period of Gastrodia elata	3.900
	SRR5643524	five period of Gastrodia elata	4.450
	SRR5643525	five period of Gastrodia elata	4.710
	SRR5643528	five period of Gastrodia elata	2.830
	SRR5643658	five period of Gastrodia elata	3.350
	SRR5643659	five period of Gastrodia elata	4.960
	SRR5643660	five period of Gastrodia elata	5.250
	SRR5643661	five period of Gastrodia elata	4.370
	SRR5643662	five period of Gastrodia elata	5.350
	SRR5643663	five period of Gastrodia elata	5.660
	SRR5643664	five period of Gastrodia elata	5.250
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.400
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.200
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.530
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.900
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.740
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.740
SRP279888	Gastro	Gastrodia elata tuber	9.04
	Juven	Juvenile tuber	13.55
	Mother_Gastro	Mother tuber of Gastrodia elata	4.63
	Mother_Juven	Mother tuber of Juvenile	8.15