Gene detail

Detail information of GWHGAAEX010619/evm.TU.scaffold_300.6

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|720069177\|ref\|XP_010277356.1\|	PREDICTED: uncharacterized protein LOC104611827 [Nelumbo nucifera]
trEMBL	tr\|F6HAL0\|F6HAL0_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49267.1}
TAIR	AT1G62870	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000296	189697	192957	+

Transcript Sequence
>GWHTAAEX010619 AAAAAAAAAAAAACAAAACAAACAGAAGAAGATCTTAAATGCGGGATCGAACTAGAGAGGTGATGAGGGATCGAACAAGAGAGAAGATGGAAGATTTGAAGGAAGAAAGGCATTCAAAAAGTTCAGTAAACATATGAAACACGAGCGGGAGGAAAGGAGAAGATGGAGAGTTATAGAACAAAAAGGGATAAATTAAAGAGATTTAAAAAAAATGAAGAACTTCGAAGAGGGATCGCAGATCGACCAAACGGAAGAAAGAAGGTTGCGTTTTTGCGGTTGAAAATTGTTGTAATGTCATCCATTTGAACAGTAGGAGGATTCAGAAAATTAACAGCAATCCTCTCTTTCAATAATTATATATTTTTTAATTATCAGAAAGATCAATCGTTGGGCATGTTTTAAGCGTGAGCTTTCATGTGCGCCTCACCGCATACATTTACAGAGATACGCTATGAGGATAAATCGAATCGAAAGCGGCTGTGGGACCCATTCCTCTCAAATCGGTCAACCGTCGGCGAAGACCGGCTGAAGAACCGAGGGGGACACTGAGACAGGGAAAGGAGTCCCCCATTTCTACTTGGAAAAGTTCGAGCTGCTGCACTGTCCTCACCTCCACTACAGTTGAAGACGACCTCAAAAAGTTTTCAATTATTTGAAAAGATTAGAAAAATAACCCCCTTCGTTTTCTGTTCATTACACAGATCAAAGTAGGTCGTGCCCTACTCACTCACCGTCTTTCTTTCCGTATGCAATCCTCTCTTTCAATAATTAAAAAAAAGGGTCGCCGGAGTTCGACTTCTGGGGGATTCTTCAAGCGAAATGTAAAAAGGTTCGATTTTTATGAATAAAAACCCGTTCTTCGAAGCGTCATGACGACGGCAAACGCGGTGTCGTCACCGACATCTCCCACAGAAACGACGCAGGCTTCCACTGCGGAGGAAATAGCGACGAAGGCTGCGTACAAGAGATTCGAAGGTCTAATGACTGTAAGAACGAAGGCGATCAAAGGGAAGGGGGCGTGGTACTGGGCACACCTGGAGCCCATCTTAATCTGCGCCTCCGACTCCGGCGCCCCCAAATCCGTCAAGCTCCGCTGCACGCTTTGCGACGCAATCTTCTCCGCTTCAAATCCCTCGCGCACAGCCTCAGAGCACCTAAAGAGAGGAACTTGCCCCAATTTCTCTTCCCCTTCTGCAGCTGGGAACGGCGGCGGAGACTGCCTGAATCATCCGCAGCAGCCTAAGCCTATCTCCTCGCTCCCTCCAAGCTCATCCCGCAAGCGCTCCTCTCATCCCTGCCAAATCGAAGTCTTTTACTCGTCGTCCCCATCCGCATCCCCTCTTCTCCCGCTTCCCTCTCCGCAGCAGCCAAGCTTCGTTCTTTCCGGCGGTAGAGACGATCTCGCCCCCCTCGCAATGCTTGAGGACAGCGTCAAGAAACTGAAAACCCCCATGGCTTCTCCAAGCACCAGACTTTCTAAAGCCCAGGTGGACACCGCTTTCTCCTACCTCTCCGATTGGTTCTACGAGTGCGCCGGAGCGATCTCCTTCTCCTCCGTCGAGCATCCCAAATTCCAATCTTTTCTTCAGCAGGTCGGCCTCCCTTCACTCTCCCGCCTGGAGCTCGCAGGCCCGCGGCTGGACGCTCGGTACGATGAGGCTCGATCCGAAGCCGACGCGCGCATTAGTGACGCCCTGTTTTTTCAGATCGCCGCCGACGGATGGAAACCTAGCGCTGGGACGGACAGCAATGATTCGCTGGTTTGCATCGCCGTGAATCTCCCCAACGGCACCTTCGTCTTCCGACGCGCGCTCATCGTTGATGCCGGCGCTCCCTTCGAGTACGCCGAGGAAGTGCTTTGGGAAGCCGCCATGAACGCCTCTGGCGGCAACGCGACACGTTGCGCCGGAATTATCTCCGACCGATTCAAATCGACGGCTCTCCGCAGCCTGGAGAACCAGCATCACTGGATGGTGAACCTCTCCTGCCAGCTTCAGGGCTTCCGCAGCCTCATCAAGGATTTCACCCGCGGCCTCTCCCTCTTCCACAATGTCGCCTCCAAATGCTCCAAAATCGCATCTTTTTTCAACACCGATTCCTCCGCGAGAGCCGTCTTCCGCAAATACCAGACGCGGGATCTCGACACTAACGGCAGTTTCATGGTCGAAGACATCGTGGCCTCCTCCCGGTCGCTGCACCTCGCCGTGCACGACGAATCTTACAAGCTTTTCTGCCTCGATAGCCCGGAAGCAGCTCAAATCGGGGATTTGATCCGCGACATAAAATTCTGGAACGAAGTTCACGCTGCCAACTCCCTCGTCAAGCTCATTGCCGGCACGATCCGCGAAATGGAAACCGAGCGCCCGCTCGTCGGGCAATGCCTGCCGCTCTGGGAGGAACTAAGAAGCAAAATCAAAGGTTGGTGCGCCAAGCACAGCGTCGATGAGACGGCCGCCCGCAAGGTGTTTGACAAAAGATTTAAAAGAAATTACCATCCGGCGTGGGCGGCCGCGTTCATACTCGATCCACTGTATCTGACCAAAGACGCCAGCGGCAAATACCTCCCGCCTTACAAGTGCTTAACCCCGGAACAGGACAAAGACGTGGACAGGCTGATAACGAGGCTCGCTTCCCGCGAAGAAGCCCACATCGTTCTGAACGAGCTGATGAAATGGAGATCTGAGGGTATGGACCCAATATACGCTCAGGCCGTGCAGGTGAAGCAACTCGACCCTCTGACGGGAAAGATGAAGCTTGCGAATCCGCAGAGCAGCAGGCTTGTGTGGGAGACTTGCCTTAGCGAGGATTTCGGCTCTTTGGGGAAAGTAGCCGTTAGGCTCATATTTCTGCATGCGACCGCTGGCGGATTCAAACGCAATGCTTCGCTGCTGCGATGGACCAAGCGCCAGCACAAGTCCAGAATGGGAATGGAGATAGCGCAAAAGATGATCTTTGTGGCGGCCCAATCAAGGCTCGAAAGGAGGGATTTTTCCGCCGATGAAGATAGGGATGGGGAGATTTTTGCTGATGCGGATGTGGATGAGGTCAATGAAGCGTTCATGGATGATGCTTCATAGGTGTAAAGAATTCTGGATTATCATTAATTTAATTCTTGTTCGTTTTTTTTTTTCTTATAATTTTCTGTGATTGATTGAACTTGTGGAATTGAATTTTGAAGAAGTTTGGCGGGTTTTATTTTTCTACAATTTGATTTTGTCTCCAGTCTGCATGCCATCGTTAGAAAGCCTGATTTAGGTTGAA

Network for GWHGAAEX010619

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.590
SRP064423	SRR2545915	Juvenile tuber	4.430
SRP108465	SRR5643513	five period of Gastrodia elata	8.960
	SRR5643514	five period of Gastrodia elata	5.000
	SRR5643515	five period of Gastrodia elata	22.650
	SRR5643524	five period of Gastrodia elata	5.520
	SRR5643525	five period of Gastrodia elata	8.900
	SRR5643528	five period of Gastrodia elata	14.810
	SRR5643658	five period of Gastrodia elata	9.520
	SRR5643659	five period of Gastrodia elata	36.540
	SRR5643660	five period of Gastrodia elata	19.170
	SRR5643661	five period of Gastrodia elata	31.710
	SRR5643662	five period of Gastrodia elata	32.490
	SRR5643663	five period of Gastrodia elata	25.490
	SRR5643664	five period of Gastrodia elata	43.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.620
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.310
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.570
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.090
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.620
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.190
SRP279888	Gastro	Gastrodia elata tuber	10.23
	Juven	Juvenile tuber	1.86
	Mother_Gastro	Mother tuber of Gastrodia elata	4.25
	Mother_Juven	Mother tuber of Juvenile	1.66