Detail information of GWHGAAEX010626/evm.TU.scaffold_303.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743764908|ref|XP_010912669.1|1.69E-40PREDICTED: probable VAMP-like protein At1g33475 [Elaeis guineensis]
Swissprottr|Q84WF5|VAMPL_ARATH2.00E-22Probable VAMP-like protein At1g33475
trEMBLtr|M0TVI9|M0TVI9_MUSAM3.00E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P32370_001}
TAIRAT4G101702.00E-23SNARE-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000295128114129058-
Transcript Sequence

Network for GWHGAAEX010626

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.650
SRR2545915Juvenile tuber2.980
SRP108465SRR5643513five period of Gastrodia elata5.230
SRR5643514five period of Gastrodia elata5.890
SRR5643515five period of Gastrodia elata6.230
SRR5643524five period of Gastrodia elata4.880
SRR5643525five period of Gastrodia elata14.440
SRR5643528five period of Gastrodia elata8.430
SRR5643658five period of Gastrodia elata10.930
SRR5643659five period of Gastrodia elata3.320
SRR5643660five period of Gastrodia elata2.420
SRR5643661five period of Gastrodia elata2.980
SRR5643662five period of Gastrodia elata5.460
SRR5643663five period of Gastrodia elata4.690
SRR5643664five period of Gastrodia elata6.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.520
SRR6049655Rhizomagastrodiae_C368-T10_good_13.590
SRR6049656Rhizomagastrodiae_C368-T07_good_17.210
SRR6049657Rhizomagastrodiae_C368-T07_good_15.260
SRR6049658Rhizomagastrodiae_C368-T04_good_18.300
SRR6049659Rhizomagastrodiae_C368-T04_good_16.620
SRR6049660Rhizomagastrodiae_C368-T01_good_16.660
SRR6049661Rhizomagastrodiae_C368-T04_good_15.940
SRR6049662Rhizomagastrodiae_C368-T01_good_111.210
SRR6049663Rhizomagastrodiae_C368-T01_good_114.100
SRR6049664Rhizomagastrodiae_C368-T10_good_110.160
SRR6049665Rhizomagastrodiae_C368-T10_good_110.160
SRP279888GastroGastrodia elata tuber 5.89
JuvenJuvenile tuber3.17
Mother_GastroMother tuber of Gastrodia elata 7.91
Mother_JuvenMother tuber of Juvenile 4.31