Detail information of GWHGAAEX010628/evm.TU.scaffold_3035.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01922.00E-37Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|645236080|ref|XP_008224568.1|7.99E-44PREDICTED: serine/threonine-protein kinase HT1-like [Prunus mume]
Swissprottr|Q2MHE4|HT1_ARATH4.00E-16Serine/threonine-protein kinase HT1
trEMBLtr|A0A067G186|A0A067G186_CITSI3.00E-43Uncharacterized protein {ECO:0000313|EMBL:KDO73363.1} (Fragment)
TAIRAT4G311702.00E-37Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000302712491506+
Transcript Sequence

Network for GWHGAAEX010628

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr3584.50E-08
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.090
SRR2545915Juvenile tuber14.280
SRP108465SRR5643513five period of Gastrodia elata42.090
SRR5643514five period of Gastrodia elata64.440
SRR5643515five period of Gastrodia elata47.860
SRR5643524five period of Gastrodia elata43.770
SRR5643525five period of Gastrodia elata326.640
SRR5643528five period of Gastrodia elata76.290
SRR5643658five period of Gastrodia elata79.280
SRR5643659five period of Gastrodia elata47.090
SRR5643660five period of Gastrodia elata55.470
SRR5643661five period of Gastrodia elata55.750
SRR5643662five period of Gastrodia elata96.620
SRR5643663five period of Gastrodia elata58.880
SRR5643664five period of Gastrodia elata77.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1136.390
SRR6049655Rhizomagastrodiae_C368-T10_good_1106.610
SRR6049656Rhizomagastrodiae_C368-T07_good_1152.530
SRR6049657Rhizomagastrodiae_C368-T07_good_1176.220
SRR6049658Rhizomagastrodiae_C368-T04_good_1118.420
SRR6049659Rhizomagastrodiae_C368-T04_good_153.310
SRR6049660Rhizomagastrodiae_C368-T01_good_1119.650
SRR6049661Rhizomagastrodiae_C368-T04_good_194.960
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.320
SRR6049663Rhizomagastrodiae_C368-T01_good_1128.650
SRR6049664Rhizomagastrodiae_C368-T10_good_1122.930
SRR6049665Rhizomagastrodiae_C368-T10_good_1122.930
SRP279888GastroGastrodia elata tuber 411.02
JuvenJuvenile tuber774.84
Mother_GastroMother tuber of Gastrodia elata 469.38
Mother_JuvenMother tuber of Juvenile 430.04