Detail information of GWHGAAEX010641/evm.TU.scaffold_306.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30771.00E-142Uncharacterized conserved protein
nrgi|743873230|ref|XP_010906763.1|1.80E-164PREDICTED: DCN1-like protein 2 [Elaeis guineensis]
trEMBLtr|A0A059BNR0|A0A059BNR0_EUCGR7.00E-160Defective in cullin neddylation protein {ECO:0000256|RuleBase:RU410713}
TAIRAT3G127601.00E-142Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000298183985222193-
Transcript Sequence

Network for GWHGAAEX010641

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14555.5UBA_49471.80E-10
PF03556.14Cullin_binding1292407.30E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms452.860
SRR2545915Juvenile tuber262.700
SRP108465SRR5643513five period of Gastrodia elata107.720
SRR5643514five period of Gastrodia elata106.110
SRR5643515five period of Gastrodia elata96.400
SRR5643524five period of Gastrodia elata98.430
SRR5643525five period of Gastrodia elata254.560
SRR5643528five period of Gastrodia elata212.950
SRR5643658five period of Gastrodia elata302.980
SRR5643659five period of Gastrodia elata108.750
SRR5643660five period of Gastrodia elata120.530
SRR5643661five period of Gastrodia elata100.970
SRR5643662five period of Gastrodia elata102.930
SRR5643663five period of Gastrodia elata121.930
SRR5643664five period of Gastrodia elata119.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1162.450
SRR6049655Rhizomagastrodiae_C368-T10_good_1160.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1131.270
SRR6049657Rhizomagastrodiae_C368-T07_good_1196.200
SRR6049658Rhizomagastrodiae_C368-T04_good_1197.060
SRR6049659Rhizomagastrodiae_C368-T04_good_1231.220
SRR6049660Rhizomagastrodiae_C368-T01_good_1155.340
SRR6049661Rhizomagastrodiae_C368-T04_good_1159.930
SRR6049662Rhizomagastrodiae_C368-T01_good_198.190
SRR6049663Rhizomagastrodiae_C368-T01_good_1134.530
SRR6049664Rhizomagastrodiae_C368-T10_good_1122.460
SRR6049665Rhizomagastrodiae_C368-T10_good_1122.460
SRP279888GastroGastrodia elata tuber 142.24
JuvenJuvenile tuber124.07
Mother_GastroMother tuber of Gastrodia elata 96.01
Mother_JuvenMother tuber of Juvenile 103.13