Detail information of GWHGAAEX010644/evm.TU.scaffold_3062.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG06982.00E-91Serine/threonine protein phosphatase
nrgi|703155002|ref|XP_010111089.1|6.91E-101putative protein phosphatase 2C 33 [Morus notabilis]
Swissprottr|Q9M8R7|P2C33_ARATH5.00E-92Probable protein phosphatase 2C 33
trEMBLtr|W9SHH4|W9SHH4_9ROSA3.00E-101Uncharacterized protein {ECO:0000313|EMBL:EXC29951.1}
TAIRAT3G027502.00E-91Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00003054161389-
Transcript Sequence

Network for GWHGAAEX010644

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C2032795.30E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.650
SRR2545915Juvenile tuber27.200
SRP108465SRR5643513five period of Gastrodia elata34.640
SRR5643514five period of Gastrodia elata32.980
SRR5643515five period of Gastrodia elata39.760
SRR5643524five period of Gastrodia elata33.810
SRR5643525five period of Gastrodia elata28.920
SRR5643528five period of Gastrodia elata53.010
SRR5643658five period of Gastrodia elata45.270
SRR5643659five period of Gastrodia elata32.680
SRR5643660five period of Gastrodia elata30.160
SRR5643661five period of Gastrodia elata34.310
SRR5643662five period of Gastrodia elata28.350
SRR5643663five period of Gastrodia elata32.480
SRR5643664five period of Gastrodia elata26.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.870
SRR6049655Rhizomagastrodiae_C368-T10_good_124.740
SRR6049656Rhizomagastrodiae_C368-T07_good_144.880
SRR6049657Rhizomagastrodiae_C368-T07_good_148.250
SRR6049658Rhizomagastrodiae_C368-T04_good_169.540
SRR6049659Rhizomagastrodiae_C368-T04_good_197.590
SRR6049660Rhizomagastrodiae_C368-T01_good_150.260
SRR6049661Rhizomagastrodiae_C368-T04_good_180.640
SRR6049662Rhizomagastrodiae_C368-T01_good_149.300
SRR6049663Rhizomagastrodiae_C368-T01_good_149.830
SRR6049664Rhizomagastrodiae_C368-T10_good_142.870
SRR6049665Rhizomagastrodiae_C368-T10_good_142.870
SRP279888GastroGastrodia elata tuber 28.24
JuvenJuvenile tuber25.60
Mother_GastroMother tuber of Gastrodia elata 185.88
Mother_JuvenMother tuber of Juvenile 96.09