Detail information of GWHGAAEX010648/evm.TU.scaffold_307.4
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|225849928|ref|YP_002730162.1| | 9.00E-27 | pfs, nacht and ankyrin domain protein [Persephonella marina EX-H1] |
| KOG | KOG0504 | 5.00E-28 | FOG: Ankyrin repeat |
| nr | gi|743880445|ref|XP_010908652.1| | 0 | PREDICTED: ankyrin repeat domain-containing protein 65-like [Elaeis guineensis] |
| Swissprot | tr|Q7EZ44|XB35_ORYSJ | 2.00E-12 | Probable E3 ubiquitin-protein ligase XBOS35 |
| trEMBL | tr|M5W4N7|M5W4N7_PRUPE | 2.00E-163 | Uncharacterized protein {ECO:0000313|EMBL:EMJ04233.1} |
| TAIR | HS13386462 | 5.00E-28 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000299 | 128031 | 129512 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010648
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00635.25 | Motile_Sperm | 5 | 107 | 2.80E-07 |
| PF12796.6 | Ank_2 | 144 | 230 | 3.40E-06 |
| PF12796.6 | Ank_2 | 237 | 321 | 2.90E-09 |
| PF13857.5 | Ank_5 | 377 | 429 | 2.40E-12 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.860 |
| SRR2545915 | Juvenile tuber | 0.480 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.180 |
| SRR5643514 | five period of Gastrodia elata | 13.710 | |
| SRR5643515 | five period of Gastrodia elata | 12.380 | |
| SRR5643524 | five period of Gastrodia elata | 11.200 | |
| SRR5643525 | five period of Gastrodia elata | 0.920 | |
| SRR5643528 | five period of Gastrodia elata | 0.670 | |
| SRR5643658 | five period of Gastrodia elata | 0.800 | |
| SRR5643659 | five period of Gastrodia elata | 4.680 | |
| SRR5643660 | five period of Gastrodia elata | 4.850 | |
| SRR5643661 | five period of Gastrodia elata | 6.810 | |
| SRR5643662 | five period of Gastrodia elata | 4.400 | |
| SRR5643663 | five period of Gastrodia elata | 3.180 | |
| SRR5643664 | five period of Gastrodia elata | 5.970 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 34.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 68.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.130 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.110 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 30.260 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.250 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 101.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 101.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.27 |
| Juven | Juvenile tuber | 1.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.19 | |
| Mother_Juven | Mother tuber of Juvenile | 1.09 |