Detail information of GWHGAAEX010650/evm.TU.scaffold_308.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 3.00E-14 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 1.00E-168 | Serine/threonine protein kinase |
| nr | gi|672135158|ref|XP_008791243.1| | 0 | PREDICTED: receptor-like serine/threonine-protein kinase At2g45590 [Phoenix dactylifera] |
| Swissprot | tr|O64639|Y2559_ARATH | 3.00E-169 | Receptor-like serine/threonine-protein kinase At2g45590 |
| trEMBL | tr|A0A068VB52|A0A068VB52_COFCA | 0 | Coffea canephora |
| TAIR | AT2G45590 | 1.00E-168 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000307 | 45991 | 48189 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010650
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 97 | 281 | 7.60E-19 |
| PF00069.24 | Pkinase | 586 | 699 | 5.00E-07 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XI |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.100 |
| SRR2545915 | Juvenile tuber | 0.120 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.600 |
| SRR5643514 | five period of Gastrodia elata | 0.580 | |
| SRR5643515 | five period of Gastrodia elata | 0.170 | |
| SRR5643524 | five period of Gastrodia elata | 0.620 | |
| SRR5643525 | five period of Gastrodia elata | 0.170 | |
| SRR5643528 | five period of Gastrodia elata | 0.110 | |
| SRR5643658 | five period of Gastrodia elata | 0.160 | |
| SRR5643659 | five period of Gastrodia elata | 0.490 | |
| SRR5643660 | five period of Gastrodia elata | 0.410 | |
| SRR5643661 | five period of Gastrodia elata | 0.550 | |
| SRR5643662 | five period of Gastrodia elata | 0.500 | |
| SRR5643663 | five period of Gastrodia elata | 0.270 | |
| SRR5643664 | five period of Gastrodia elata | 0.820 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.240 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.070 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.120 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.180 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.140 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.18 |
| Juven | Juvenile tuber | 1.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.44 | |
| Mother_Juven | Mother tuber of Juvenile | 1.02 |