Gene detail

Detail information of GWHGAAEX010651/evm.TU.scaffold_308.6

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0758	8.00E-167	Mitochondrial carnitine-acylcarnitine carrier protein
nr	gi\|720061575\|ref\|XP_010275212.1\|	9.20E-179	PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Nelumbo nucifera]
Swissprot	tr\|Q93XM7\|MCAT_ARATH	7.00E-170	Mitochondrial carnitine/acylcarnitine carrier-like protein
trEMBL	tr\|A0A067KDN2\|A0A067KDN2_JATCU	6.00E-177	Uncharacterized protein {ECO:0000313\|EMBL:KDP34326.1}
TAIR	AT5G46800	8.00E-167	Mitochondrial substrate carrier family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000307	69246	85023	+

Transcript Sequence
>GWHTAAEX010651 GATTCAAAAACTCGTCCGTCAAATCCCTTAAGGCAGGCGATTAAAACATTTCTCTAAAGAACATGAAATCAATTCTTTTAACAGAGGCTCATCCGAGATCTGTGAAAACCCAATTCAATTCAGTTCAGCGCCCCTCAACTAAAGACAAAAAAAGGTGATGACCATCCCCAATATGCCCCCAATTCCAATTTGATAAAGCGTCGTTCTGCTCTTCGTCGTTGAAGAGTTGCCCTAGCTTCGGAAAATTGGCTCTCTTCCTCCCCGCCGCTGAGCATTCACGGCGGGTGATCTTCTTCCGGAATCTACTCCAGTTGAATCTCTAATAAGAGTGGAAAAAGTTCCATCCGCAGAGCGTTTTGGGGGAAGTTTGCCGTGCCGTTGAATTTTTTATTTAAAGGAATCGCCCACAGAGAGAGCTTTGCCGATTTGAGGGCAAAGAGATCACCCTAGGAGGAGCTCACAACCGATGGCTGGACCTCGGATCCACATATGATGCATCATTCCGACCTTCGCCTCCCAAGTTATTGAATGGCGTTAAATGGGTTAAATGGCGTCAATTTGGTGAAATCGGTGATGGCAGACATTGTTAAGGACTTAACTTCTGGAACAATTGGAGGTTCTGCACAACTGATTGTTGGGCACCCTTTTGACACAGTAAAAGTCAAGCTCCAAAGCCAGCCGACCCCGCTTCCTGGCCAACTCCCCAAGTATTTTGGTGCTATGGATGCTGTTAAGCAGACAATTGCTTCAGAAGGCTCGAGGGGTTTATACAAAGGGATGGGAGTTCCCCTCACCACAGTTGCAGCCTTCAATGCCGTATTGTTTACTGTGAGAGGGCAGATGGAAGCTTTGCTAAGGCCCGAACCTGGTGTTCCCCTCACAGTGCAACAGCAGGTAATTTGTGGCGCGGGTGCTGGACTCGCTGTTTCATTTCTAGCATGTCCTACAGAGCTAATCAAGTGTAGATTGCAGGCACAAAGTGCTATATCAACGTCGACTGCTGTGGGTGGCGTCAAGTATGGTGGACCCATGGATGTGGCAAGGCATGTTCTGAGGTTTGAAGGGGGCTTAAGAGGCTTATTCAAGGGCCTGGTTCCGACCATAGCACGAGAGGTACCTGGGAATGCCGCTTTGTTTGGTGTTTATGAAACACTCAAGCAGTCGTTCGCAGGCAGTCGGGACACCTCAGGGCTCAGTCAAGGTTCGCTAATGGCCGCCGGAGGATTGGCTGGCGCATGCTTCTGGGCATTTGTGTATCCTACTGATGTTGTGAAAAGCGTGATTCAGGTTGATGATTACCGAAATCCAAAATTCTCTGGCACTGTTGATGCCTTCAAGAAGATCTTAGCAGCTGAAGGGCTGAAGGGACTGTACAAGGGATTTGGTCCTGCCATGGCCAGAAGTGTTCCTGCCAACGCTGCTTGTTTTTTGGCATATGAGGTCACCAGATCTAGTCTTGGGTAGAGGGTATAAGATGTGCTGCATTTATTGAATCTGAATCATAAAATTAACATTTATTTATTGCATCTGTATGATCTTATTCTTTAGATCTCTGATTTGTTTCTCTGCAATTTCTCGGCTTATACTCTTATTAGATGATTCTTGTTGAACAATCGTGGAACAATTGTTCTATAAACTGAATACAAATTTAATTGCAGATGTGAATATGTTTTGTGAGTGGTTTTCTTTTTATATTTATTTTATGTTTTTTATGATGTGAATATATTAATTTTATTTTATATTTTGTATTTTTAGTAAGATGTATAGAATA

Network for GWHGAAEX010651

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.26	Mito_carr	19	109	3.10E-17
PF00153.26	Mito_carr	117	214	3.30E-21
PF00153.26	Mito_carr	228	309	1.20E-21

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15109	SLC25A20_29, CACT, CACL, CRC1	Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.030
SRP064423	SRR2545915	Juvenile tuber	27.370
SRP108465	SRR5643513	five period of Gastrodia elata	42.770
	SRR5643514	five period of Gastrodia elata	43.980
	SRR5643515	five period of Gastrodia elata	43.500
	SRR5643524	five period of Gastrodia elata	40.640
	SRR5643525	five period of Gastrodia elata	81.440
	SRR5643528	five period of Gastrodia elata	79.090
	SRR5643658	five period of Gastrodia elata	69.500
	SRR5643659	five period of Gastrodia elata	51.770
	SRR5643660	five period of Gastrodia elata	42.680
	SRR5643661	five period of Gastrodia elata	38.190
	SRR5643662	five period of Gastrodia elata	47.240
	SRR5643663	five period of Gastrodia elata	47.900
	SRR5643664	five period of Gastrodia elata	59.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	35.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	51.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	41.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	46.670
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	54.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	37.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	37.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	26.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.620
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.620
SRP279888	Gastro	Gastrodia elata tuber	34.64
	Juven	Juvenile tuber	39.50
	Mother_Gastro	Mother tuber of Gastrodia elata	73.42
	Mother_Juven	Mother tuber of Juvenile	54.99