Detail information of GWHGAAEX010655/evm.TU.scaffold_308.8


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000003078564386399-
Transcript Sequence

Network for GWHGAAEX010655

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box44864.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.120
SRR2545915Juvenile tuber0.410
SRP108465SRR5643513five period of Gastrodia elata1.830
SRR5643514five period of Gastrodia elata0.990
SRR5643515five period of Gastrodia elata1.340
SRR5643524five period of Gastrodia elata2.470
SRR5643525five period of Gastrodia elata2.930
SRR5643528five period of Gastrodia elata3.050
SRR5643658five period of Gastrodia elata5.400
SRR5643659five period of Gastrodia elata1.060
SRR5643660five period of Gastrodia elata1.750
SRR5643661five period of Gastrodia elata1.660
SRR5643662five period of Gastrodia elata2.110
SRR5643663five period of Gastrodia elata1.870
SRR5643664five period of Gastrodia elata2.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.490
SRR6049655Rhizomagastrodiae_C368-T10_good_10.140
SRR6049656Rhizomagastrodiae_C368-T07_good_10.400
SRR6049657Rhizomagastrodiae_C368-T07_good_10.730
SRR6049658Rhizomagastrodiae_C368-T04_good_11.160
SRR6049659Rhizomagastrodiae_C368-T04_good_10.270
SRR6049660Rhizomagastrodiae_C368-T01_good_10.100
SRR6049661Rhizomagastrodiae_C368-T04_good_10.380
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.180
SRR6049664Rhizomagastrodiae_C368-T10_good_10.480
SRR6049665Rhizomagastrodiae_C368-T10_good_10.480
SRP279888GastroGastrodia elata tuber 0.99
JuvenJuvenile tuber2.06
Mother_GastroMother tuber of Gastrodia elata 1.63
Mother_JuvenMother tuber of Juvenile 2.45