Detail information of GWHGAAEX010662/evm.TU.scaffold_308.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|224372440|ref|YP_002606812.1|3.00E-09cDNA sequence [Nautilia profundicola AmH]
KOGKOG44506.00E-66Uncharacterized conserved protein
nrgi|695021486|ref|XP_009397831.1|2.57E-73PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M8T3|Y2910_ARATH7.00E-67Putative gamma-glutamylcyclotransferase At3g02910
trEMBLtr|M0SSJ1|M0SSJ1_MUSAM1.00E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P27290_001}
TAIRAT3G029106.00E-66AIG2-like (avirulence induced gene) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000307220190221398+
Transcript Sequence

Network for GWHGAAEX010662

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06094.11GGACT141311.20E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.650
SRR2545915Juvenile tuber7.860
SRP108465SRR5643513five period of Gastrodia elata32.930
SRR5643514five period of Gastrodia elata51.450
SRR5643515five period of Gastrodia elata37.630
SRR5643524five period of Gastrodia elata46.330
SRR5643525five period of Gastrodia elata54.600
SRR5643528five period of Gastrodia elata87.180
SRR5643658five period of Gastrodia elata42.490
SRR5643659five period of Gastrodia elata28.860
SRR5643660five period of Gastrodia elata18.140
SRR5643661five period of Gastrodia elata20.580
SRR5643662five period of Gastrodia elata48.140
SRR5643663five period of Gastrodia elata21.760
SRR5643664five period of Gastrodia elata25.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1104.390
SRR6049656Rhizomagastrodiae_C368-T07_good_131.520
SRR6049657Rhizomagastrodiae_C368-T07_good_117.090
SRR6049658Rhizomagastrodiae_C368-T04_good_113.560
SRR6049659Rhizomagastrodiae_C368-T04_good_114.490
SRR6049660Rhizomagastrodiae_C368-T01_good_114.180
SRR6049661Rhizomagastrodiae_C368-T04_good_114.980
SRR6049662Rhizomagastrodiae_C368-T01_good_143.960
SRR6049663Rhizomagastrodiae_C368-T01_good_129.960
SRR6049664Rhizomagastrodiae_C368-T10_good_179.120
SRR6049665Rhizomagastrodiae_C368-T10_good_179.120
SRP279888GastroGastrodia elata tuber 7.99
JuvenJuvenile tuber353.51
Mother_GastroMother tuber of Gastrodia elata 35.51
Mother_JuvenMother tuber of Juvenile 60.47