Detail information of GWHGAAEX010672/evm.TU.scaffold_31.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|124024538|ref|YP_001018845.1|2.00E-09hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT 9303]
KOGKOG13096.00E-91Suppressor of G2 allele of skp1
nrgi|743756452|ref|XP_010916837.1|3.06E-167PREDICTED: protein SGT1 homolog [Elaeis guineensis]
Swissprottr|Q0JL44|SGT1_ORYSJ4.00E-157Protein SGT1 homolog
trEMBLtr|A0A068UA07|A0A068UA07_COFCA2.00E-163Coffea canephora
TAIRAT4G23570_26.00E-91Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000028590869618536+
Transcript Sequence

Network for GWHGAAEX010672

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14559.5TPR_1917571.80E-06
PF04969.15CS1722471.30E-14
PF05002.14SGS2863653.00E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12795SUGT1, SGT1 NOD-like receptor signaling pathway map04621
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms513.710
SRR2545915Juvenile tuber432.710
SRP108465SRR5643513five period of Gastrodia elata141.290
SRR5643514five period of Gastrodia elata138.490
SRR5643515five period of Gastrodia elata161.540
SRR5643524five period of Gastrodia elata120.150
SRR5643525five period of Gastrodia elata153.020
SRR5643528five period of Gastrodia elata175.770
SRR5643658five period of Gastrodia elata139.360
SRR5643659five period of Gastrodia elata271.740
SRR5643660five period of Gastrodia elata319.220
SRR5643661five period of Gastrodia elata238.650
SRR5643662five period of Gastrodia elata260.440
SRR5643663five period of Gastrodia elata295.280
SRR5643664five period of Gastrodia elata329.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1285.920
SRR6049655Rhizomagastrodiae_C368-T10_good_1178.230
SRR6049656Rhizomagastrodiae_C368-T07_good_1210.460
SRR6049657Rhizomagastrodiae_C368-T07_good_1363.300
SRR6049658Rhizomagastrodiae_C368-T04_good_1317.510
SRR6049659Rhizomagastrodiae_C368-T04_good_1374.920
SRR6049660Rhizomagastrodiae_C368-T01_good_1269.190
SRR6049661Rhizomagastrodiae_C368-T04_good_1284.400
SRR6049662Rhizomagastrodiae_C368-T01_good_1172.780
SRR6049663Rhizomagastrodiae_C368-T01_good_1189.190
SRR6049664Rhizomagastrodiae_C368-T10_good_1184.740
SRR6049665Rhizomagastrodiae_C368-T10_good_1184.740
SRP279888GastroGastrodia elata tuber 334.44
JuvenJuvenile tuber220.29
Mother_GastroMother tuber of Gastrodia elata 85.10
Mother_JuvenMother tuber of Juvenile 136.28