Detail information of GWHGAAEX010677/evm.TU.scaffold_31.23
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383455469|ref|YP_005369458.1| | 1.00E-22 | serine/threonine protein kinase [Corallococcus coralloides DSM 2259] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|672142457|ref|XP_008795084.1| | 0 | PREDICTED: proline-rich receptor-like protein kinase PERK1 [Phoenix dactylifera] |
| Swissprot | tr|Q9LV48|PERK1_ARATH | 0 | Proline-rich receptor-like protein kinase PERK1 |
| trEMBL | tr|U5FG22|U5FG22_POPTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERP49850.1} |
| TAIR | AT3G24550 | 0 | proline extensin-like receptor kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000028 | 1829854 | 1844741 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010677
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 125 | 390 | 3.60E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_PERK-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.940 |
| SRR2545915 | Juvenile tuber | 2.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.860 |
| SRR5643514 | five period of Gastrodia elata | 7.080 | |
| SRR5643515 | five period of Gastrodia elata | 5.030 | |
| SRR5643524 | five period of Gastrodia elata | 5.600 | |
| SRR5643525 | five period of Gastrodia elata | 2.640 | |
| SRR5643528 | five period of Gastrodia elata | 2.670 | |
| SRR5643658 | five period of Gastrodia elata | 3.000 | |
| SRR5643659 | five period of Gastrodia elata | 1.710 | |
| SRR5643660 | five period of Gastrodia elata | 1.660 | |
| SRR5643661 | five period of Gastrodia elata | 1.560 | |
| SRR5643662 | five period of Gastrodia elata | 1.530 | |
| SRR5643663 | five period of Gastrodia elata | 2.120 | |
| SRR5643664 | five period of Gastrodia elata | 1.650 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.810 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.140 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.010 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.250 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.090 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.140 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.140 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.27 |
| Juven | Juvenile tuber | 3.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.95 | |
| Mother_Juven | Mother tuber of Juvenile | 1.82 |