Detail information of GWHGAAEX010689/evm.TU.scaffold_31.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743760459|ref|XP_010936949.1|1.88E-62PREDICTED: LOW QUALITY PROTEIN: G-box-binding factor 1-like [Elaeis guineensis]
Swissprottr|P42774|GBF1_ARATH2.00E-34G-box-binding factor 1
trEMBLtr|A0A0A0KGY0|A0A0A0KGY0_CUCSA4.00E-49Uncharacterized protein {ECO:0000313|EMBL:KGN48813.1}
TAIRAT4G367308.00E-34G-box binding factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002832353403241327+
Transcript Sequence

Network for GWHGAAEX010689

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07777.10MFMR12869.20E-14
PF16596.4MFMR_assoc1082233.50E-07
PF00170.20bZIP_12582821.70E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.540
SRR2545915Juvenile tuber42.450
SRP108465SRR5643513five period of Gastrodia elata36.660
SRR5643514five period of Gastrodia elata27.560
SRR5643515five period of Gastrodia elata24.970
SRR5643524five period of Gastrodia elata27.080
SRR5643525five period of Gastrodia elata21.570
SRR5643528five period of Gastrodia elata24.200
SRR5643658five period of Gastrodia elata28.300
SRR5643659five period of Gastrodia elata25.350
SRR5643660five period of Gastrodia elata26.420
SRR5643661five period of Gastrodia elata28.410
SRR5643662five period of Gastrodia elata25.910
SRR5643663five period of Gastrodia elata26.340
SRR5643664five period of Gastrodia elata28.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.290
SRR6049655Rhizomagastrodiae_C368-T10_good_140.580
SRR6049656Rhizomagastrodiae_C368-T07_good_135.130
SRR6049657Rhizomagastrodiae_C368-T07_good_145.760
SRR6049658Rhizomagastrodiae_C368-T04_good_148.830
SRR6049659Rhizomagastrodiae_C368-T04_good_150.910
SRR6049660Rhizomagastrodiae_C368-T01_good_140.830
SRR6049661Rhizomagastrodiae_C368-T04_good_135.970
SRR6049662Rhizomagastrodiae_C368-T01_good_127.450
SRR6049663Rhizomagastrodiae_C368-T01_good_130.590
SRR6049664Rhizomagastrodiae_C368-T10_good_128.950
SRR6049665Rhizomagastrodiae_C368-T10_good_128.950
SRP279888GastroGastrodia elata tuber 39.92
JuvenJuvenile tuber65.57
Mother_GastroMother tuber of Gastrodia elata 48.50
Mother_JuvenMother tuber of Juvenile 66.51