Detail information of GWHGAAEX010690/evm.TU.scaffold_31.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743760459|ref|XP_010936949.1|1.20E-12PREDICTED: LOW QUALITY PROTEIN: G-box-binding factor 1-like [Elaeis guineensis]
Swissprottr|P25032|EMBP1_WHEAT6.00E-09DNA-binding protein EMBP-1
trEMBLtr|J3MJE6|J3MJE6_ORYBR3.00E-12Uncharacterized protein {ECO:0000313|EnsemblPlants:OB07G15280.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002832643263265559+
Transcript Sequence

Network for GWHGAAEX010690

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_143812.80E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.800
SRR2545915Juvenile tuber3.090
SRP108465SRR5643513five period of Gastrodia elata1.360
SRR5643514five period of Gastrodia elata1.080
SRR5643515five period of Gastrodia elata0.780
SRR5643524five period of Gastrodia elata0.880
SRR5643525five period of Gastrodia elata0.970
SRR5643528five period of Gastrodia elata0.690
SRR5643658five period of Gastrodia elata0.520
SRR5643659five period of Gastrodia elata0.870
SRR5643660five period of Gastrodia elata1.210
SRR5643661five period of Gastrodia elata1.100
SRR5643662five period of Gastrodia elata0.950
SRR5643663five period of Gastrodia elata1.080
SRR5643664five period of Gastrodia elata0.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.130
SRR6049655Rhizomagastrodiae_C368-T10_good_10.150
SRR6049656Rhizomagastrodiae_C368-T07_good_10.940
SRR6049657Rhizomagastrodiae_C368-T07_good_11.610
SRR6049658Rhizomagastrodiae_C368-T04_good_12.060
SRR6049659Rhizomagastrodiae_C368-T04_good_11.370
SRR6049660Rhizomagastrodiae_C368-T01_good_11.630
SRR6049661Rhizomagastrodiae_C368-T04_good_11.040
SRR6049662Rhizomagastrodiae_C368-T01_good_10.360
SRR6049663Rhizomagastrodiae_C368-T01_good_11.430
SRR6049664Rhizomagastrodiae_C368-T10_good_10.990
SRR6049665Rhizomagastrodiae_C368-T10_good_10.990
SRP279888GastroGastrodia elata tuber 3.33
JuvenJuvenile tuber4.19
Mother_GastroMother tuber of Gastrodia elata 3.90
Mother_JuvenMother tuber of Juvenile 3.91