Gene detail

Detail information of GWHGAAEX010691/evm.TU.scaffold_31.46

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1379	2.00E-147	Serine/threonine protein phosphatase
nr	gi\|743791499\|ref\|XP_010923448.1\|	0	PREDICTED: probable protein phosphatase 2C 55 [Elaeis guineensis]
Swissprot	tr\|Q9SUK9\|P2C55_ARATH	5.00E-150	Probable protein phosphatase 2C 55
trEMBL	tr\|M0TCV1\|M0TCV1_MUSAM	3.00E-174	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P35080_001}
TAIR	AT4G16580	2.00E-147	Protein phosphatase 2C family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000028	3330538	3377745	-

Transcript Sequence
>GWHTAAEX010691 CACCAATACTCTTAACAAAAAAGAAAAAATTATACAAATTGATTTAATACGTTTAATTTAATAATTAATTATTAAAATAAAAAGAGAAACACTACTCCGCACTTGGGAAAACCCAAGTAGCCTCCCCTCGCTCAGGTTTTTGTTATTTCCAGCTCTGCGATCCCTCTCCTCGCTACTCTTTTTTTCTTCTTCTTATCATCGTTCAAAAACTCTGCGATCTTCTCTCCCGCGATATCTCCACATCTTATTCTTCTTATCATCTACTTGTCTAATTTGTAAATCGCTAAGTCCTACAAAACCAGAAATTTCAGAATTAGATCGCCTGATTCCTGCAATCAAACACCCCCCATAAGGTTGGTGACATTATGGGAGATGAAATATATGTTGCAATTTTCTAAGGAGTCTTATAGGTAGAAGGATTCTTCCTCACCTCCATATGGTCAAGATGCCCATTTCTTTGTTTCCTAAGCAAAAGGGTATGCATTCAGAGCTTTTGGGACGTGGTAGGGATGTAATTTTTGGTAGGACCTGGCAGTTCTTATCGCAACCATTTTCGACCACCGGCCTTTTCCCTCAGTTTGGTGCAAATGGGGTGAATACTGTGCGCACAGTTGATCAGCGAGCAATATTTTCTTTCATTGGAACAATATCCCGCATCTTTTCTTTTCCTGCAGCGTCCGGCCTTCTTTGTCAATCCTGTGTAAAGAAAATTGACAATTTTTTCTCGGAGCCCACACAAAGATATTTATTTACTGCAATCCAGAGAAATATAATGTATGCTTGTGGTTATTTAACAGGAAAATCAGAATCTGTTTCCCATAATTTCTGCTATGGGTACCAAATAAATGGACATGCACAGACTGTGATTCGAAATGGTATTTGCAATGCACATGCGCGTCTTGATCATTGCAGAATTATCAATGGAGGCCTGCATAATCATGTGCTAAGGGGCAGGAAATTGAGTAAATGGCTAGCATCATCCGGTGCTACTGGATTTTGTTCAAATTATGTACCATGCTTTGCATTATGGAATAGGGACTTTCAACTTGCTTGTGGATCCACTTATTCTACTGGAGCTGTTAGGAATGTTTCTCTTGATAGGCTGCCACACGACGGGATATTTGAAAGCTCGGTTGTTGAGCAAAACAGGAAGTCACTGGGTGATAGACCCTTGAAGCTACTTTCTGGGTCATGTTATCTTCCGCACCCAGATAAGGAAGAAACTGGAGGAGAAGATGCACATTTTTTATGTGATGACGAACAAGCATTTGGAGTTGCAGATGGTGTTGGTGGATGGGCAGACCGTGGTGTTGATGCTGGGAAGTATGCTAAAGAACTTATGTCTAATTCTGTATCTGCAATTCAAGATGAACCAATGGGGCTGATCAATCCTTTGAGGGTGTTAGAAAAAGCCTACTCTTGTACTAAATCCAAGGGATCATCAACAGCCTGCGTTATAGCTCTTACCGATCAGGGGATTCATGCTGTCAACCTTGGAGATAGTGGATTTATTATTGTTAGAGATGGATGCACAATATTTCGTTCTCCGGTTCAACAGCATGATTTTAATTTTACTTACCAACTTGAGAGTGATAATGCTAGTGATCTTCCTAGTTCGGCTCAGGTTTTTACTTTCCCTGTTGAGCCAGGAGATGTCGTCGTTGCGGGAACGGATGGATTATTTGATAATTTGTACAACAATGAAATTAATGCCATTGTAGTTCATGCTATGAGGGCCCGACTTGGGCCACAGGTGACAGCTCAGAAAATAGCCGCACTTGCTCGCCAGCGAGCTCAGGACAAGAACAGGCAAACTCCGTTCTCGACGGCAGCTCAGGATGCCGGATTTAGATACTATGGGGGCAAATTGGATGATATCACAGTTGTTGTCTCCCATGTCACTGCTGCCTCTACTATCTGAGAGACTATTTATTCTGTTTTTTTCCTTTTTTTGTTGATATAATTTCTTTCTTACACAAGACTAGGGATTTTTATCTACCTAACACCCAAAGCTTTATTATATACATATTTAGCACCCAAACTTTAATTTTTACACTTAACATGCTCATCAACTCCTCATTTCTAAAATAATTGATACATCATTTCTACTTGACATGATAAGGGTTTTAAAATTGGAGAATAGTAAAGTTTGGGTGTCGAATATGCGGGTTTATTAGGATTTGGCTGCTATGTATATGGAACCTGATTTTTGTACAGCTTTCTAACTTTGAAAGAGGGATAGAGACCAAAGCATCA

Network for GWHGAAEX010691

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13672.5	PP2C_2	266	433	3.90E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.510
SRP064423	SRR2545915	Juvenile tuber	16.020
SRP108465	SRR5643513	five period of Gastrodia elata	13.810
	SRR5643514	five period of Gastrodia elata	14.870
	SRR5643515	five period of Gastrodia elata	15.030
	SRR5643524	five period of Gastrodia elata	17.170
	SRR5643525	five period of Gastrodia elata	11.950
	SRR5643528	five period of Gastrodia elata	14.540
	SRR5643658	five period of Gastrodia elata	14.190
	SRR5643659	five period of Gastrodia elata	12.130
	SRR5643660	five period of Gastrodia elata	11.380
	SRR5643661	five period of Gastrodia elata	12.660
	SRR5643662	five period of Gastrodia elata	12.200
	SRR5643663	five period of Gastrodia elata	12.960
	SRR5643664	five period of Gastrodia elata	12.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.920
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.950
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.530
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.890
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.840
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.960
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.150
SRP279888	Gastro	Gastrodia elata tuber	21.64
	Juven	Juvenile tuber	26.88
	Mother_Gastro	Mother tuber of Gastrodia elata	25.25
	Mother_Juven	Mother tuber of Juvenile	34.99