Detail information of GWHGAAEX010698/evm.TU.scaffold_31.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410667760|ref|YP_006920131.1|2.00E-26serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
KOGKOG01920Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|672137159|ref|XP_008792297.1|0PREDICTED: LOW QUALITY PROTEIN: dual specificity protein kinase shkB-like [Phoenix dactylifera]
Swissprottr|Q2MHE4|HT1_ARATH2.00E-40Serine/threonine-protein kinase HT1
trEMBLtr|M0TA98|M0TA98_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P26030_001}
TAIRAT3G587600Integrin-linked protein kinase family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002839181473949551-
Transcript Sequence

Network for GWHGAAEX010698

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12796.6Ank_2501391.10E-11
PF07714.16Pkinase_Tyr1694205.70E-53
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-5

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005515Molecular Functionprotein binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.680
SRR2545915Juvenile tuber24.820
SRP108465SRR5643513five period of Gastrodia elata29.040
SRR5643514five period of Gastrodia elata27.190
SRR5643515five period of Gastrodia elata28.390
SRR5643524five period of Gastrodia elata27.840
SRR5643525five period of Gastrodia elata27.550
SRR5643528five period of Gastrodia elata28.720
SRR5643658five period of Gastrodia elata26.080
SRR5643659five period of Gastrodia elata29.990
SRR5643660five period of Gastrodia elata28.760
SRR5643661five period of Gastrodia elata26.330
SRR5643662five period of Gastrodia elata24.270
SRR5643663five period of Gastrodia elata22.980
SRR5643664five period of Gastrodia elata21.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.330
SRR6049655Rhizomagastrodiae_C368-T10_good_127.900
SRR6049656Rhizomagastrodiae_C368-T07_good_141.450
SRR6049657Rhizomagastrodiae_C368-T07_good_131.520
SRR6049658Rhizomagastrodiae_C368-T04_good_129.730
SRR6049659Rhizomagastrodiae_C368-T04_good_125.650
SRR6049660Rhizomagastrodiae_C368-T01_good_131.020
SRR6049661Rhizomagastrodiae_C368-T04_good_131.630
SRR6049662Rhizomagastrodiae_C368-T01_good_133.920
SRR6049663Rhizomagastrodiae_C368-T01_good_127.750
SRR6049664Rhizomagastrodiae_C368-T10_good_137.250
SRR6049665Rhizomagastrodiae_C368-T10_good_137.250
SRP279888GastroGastrodia elata tuber 29.52
JuvenJuvenile tuber42.46
Mother_GastroMother tuber of Gastrodia elata 27.45
Mother_JuvenMother tuber of Juvenile 27.31