Detail information of GWHGAAEX010700/evm.TU.scaffold_31.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383453157|ref|YP_005367146.1|1.00E-149putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB [Corallococcus coralloides DSM 2259]
KOGKOG10500Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|743756323|ref|XP_010916228.1|0PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Elaeis guineensis]
Swissprottr|Q9SYM4|TPS1_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
trEMBLtr|M0TAA6|M0TAA6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P26110_001}
TAIRAT1G785800trehalose-6-phosphate synthase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002842615944277191+
Transcript Sequence

Network for GWHGAAEX010700

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00982.20Glyco_transf_20975621.30E-183
PF02358.15Trehalose_PPase6228368.90E-55
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20

KEGG pathway

KO Enzyme pathway mapID
K16055TPS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity
GO:0003825Molecular Functionalpha,alpha-trehalose-phosphate synthase (UDP-forming) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.960
SRR2545915Juvenile tuber53.110
SRP108465SRR5643513five period of Gastrodia elata63.130
SRR5643514five period of Gastrodia elata69.800
SRR5643515five period of Gastrodia elata69.940
SRR5643524five period of Gastrodia elata72.140
SRR5643525five period of Gastrodia elata67.090
SRR5643528five period of Gastrodia elata65.060
SRR5643658five period of Gastrodia elata64.530
SRR5643659five period of Gastrodia elata99.630
SRR5643660five period of Gastrodia elata100.700
SRR5643661five period of Gastrodia elata84.480
SRR5643662five period of Gastrodia elata65.290
SRR5643663five period of Gastrodia elata78.790
SRR5643664five period of Gastrodia elata60.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_164.110
SRR6049655Rhizomagastrodiae_C368-T10_good_144.280
SRR6049656Rhizomagastrodiae_C368-T07_good_167.310
SRR6049657Rhizomagastrodiae_C368-T07_good_169.950
SRR6049658Rhizomagastrodiae_C368-T04_good_161.320
SRR6049659Rhizomagastrodiae_C368-T04_good_163.840
SRR6049660Rhizomagastrodiae_C368-T01_good_168.620
SRR6049661Rhizomagastrodiae_C368-T04_good_160.990
SRR6049662Rhizomagastrodiae_C368-T01_good_163.070
SRR6049663Rhizomagastrodiae_C368-T01_good_162.590
SRR6049664Rhizomagastrodiae_C368-T10_good_166.060
SRR6049665Rhizomagastrodiae_C368-T10_good_166.060
SRP279888GastroGastrodia elata tuber 61.89
JuvenJuvenile tuber75.70
Mother_GastroMother tuber of Gastrodia elata 35.29
Mother_JuvenMother tuber of Juvenile 44.65