Detail information of GWHGAAEX010707/evm.TU.scaffold_31.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743886323|ref|XP_010910117.1|0PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Elaeis guineensis]
Swissprottr|F4K460|MED17_ARATH0Mediator of RNA polymerase II transcription subunit 17
trEMBLtr|M0S667|M0S667_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P08260_001}
TAIRAT5G201700RNA polymerase II transcription mediators

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002854318105438502+
Transcript Sequence

Network for GWHGAAEX010707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15133MED17 Thyroid hormone signaling pathway map04919

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.910
SRR2545915Juvenile tuber26.050
SRP108465SRR5643513five period of Gastrodia elata28.440
SRR5643514five period of Gastrodia elata34.040
SRR5643515five period of Gastrodia elata32.630
SRR5643524five period of Gastrodia elata35.710
SRR5643525five period of Gastrodia elata25.120
SRR5643528five period of Gastrodia elata24.520
SRR5643658five period of Gastrodia elata22.400
SRR5643659five period of Gastrodia elata31.760
SRR5643660five period of Gastrodia elata30.720
SRR5643661five period of Gastrodia elata29.790
SRR5643662five period of Gastrodia elata34.350
SRR5643663five period of Gastrodia elata29.230
SRR5643664five period of Gastrodia elata28.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.740
SRR6049655Rhizomagastrodiae_C368-T10_good_123.850
SRR6049656Rhizomagastrodiae_C368-T07_good_123.210
SRR6049657Rhizomagastrodiae_C368-T07_good_130.320
SRR6049658Rhizomagastrodiae_C368-T04_good_128.400
SRR6049659Rhizomagastrodiae_C368-T04_good_130.060
SRR6049660Rhizomagastrodiae_C368-T01_good_128.420
SRR6049661Rhizomagastrodiae_C368-T04_good_126.010
SRR6049662Rhizomagastrodiae_C368-T01_good_122.430
SRR6049663Rhizomagastrodiae_C368-T01_good_125.540
SRR6049664Rhizomagastrodiae_C368-T10_good_125.120
SRR6049665Rhizomagastrodiae_C368-T10_good_125.120
SRP279888GastroGastrodia elata tuber 38.14
JuvenJuvenile tuber52.35
Mother_GastroMother tuber of Gastrodia elata 36.28
Mother_JuvenMother tuber of Juvenile 51.04