Detail information of GWHGAAEX010710/evm.TU.scaffold_31.87


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21342.00E-70Polynucleotide kinase 3' phosphatase
nrgi|743796666|ref|XP_010924786.1|5.84E-126PREDICTED: polynucleotide 3'-phosphatase ZDP isoform X3 [Elaeis guineensis]
Swissprottr|Q84JE8|ZDP_ARATH3.00E-97Polynucleotide 3'-phosphatase ZDP
trEMBLtr|A0A022RYF3|A0A022RYF3_ERYGU4.00E-119Uncharacterized protein {ECO:0000313|EMBL:EYU45026.1}
TAIRAT3G14890_22.00E-70Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002855410355581621+
Transcript Sequence

Network for GWHGAAEX010710

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00645.17zf-PARP9823.30E-13
PF08645.10PNK3P1652934.10E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.520
SRR2545915Juvenile tuber25.320
SRP108465SRR5643513five period of Gastrodia elata12.390
SRR5643514five period of Gastrodia elata12.180
SRR5643515five period of Gastrodia elata11.970
SRR5643524five period of Gastrodia elata15.230
SRR5643525five period of Gastrodia elata8.960
SRR5643528five period of Gastrodia elata9.620
SRR5643658five period of Gastrodia elata9.030
SRR5643659five period of Gastrodia elata15.800
SRR5643660five period of Gastrodia elata15.910
SRR5643661five period of Gastrodia elata15.520
SRR5643662five period of Gastrodia elata13.340
SRR5643663five period of Gastrodia elata14.300
SRR5643664five period of Gastrodia elata14.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.280
SRR6049655Rhizomagastrodiae_C368-T10_good_111.150
SRR6049656Rhizomagastrodiae_C368-T07_good_111.850
SRR6049657Rhizomagastrodiae_C368-T07_good_110.610
SRR6049658Rhizomagastrodiae_C368-T04_good_19.310
SRR6049659Rhizomagastrodiae_C368-T04_good_18.860
SRR6049660Rhizomagastrodiae_C368-T01_good_18.690
SRR6049661Rhizomagastrodiae_C368-T04_good_18.040
SRR6049662Rhizomagastrodiae_C368-T01_good_112.620
SRR6049663Rhizomagastrodiae_C368-T01_good_112.010
SRR6049664Rhizomagastrodiae_C368-T10_good_117.570
SRR6049665Rhizomagastrodiae_C368-T10_good_117.570
SRP279888GastroGastrodia elata tuber 26.31
JuvenJuvenile tuber16.31
Mother_GastroMother tuber of Gastrodia elata 21.06
Mother_JuvenMother tuber of Juvenile 12.14