Detail information of GWHGAAEX010711/evm.TU.scaffold_31.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG02542.00E-12Predicted transporter (major facilitator superfamily)
nrgi|586686041|ref|XP_006841840.1|1.02E-12hypothetical protein AMTR_s00003p00270510 [Amborella trichopoda]
Swissprottr|Q9FMX3|STP11_ARATH5.00E-13Sugar transport protein 11
trEMBLtr|W1P946|W1P946_AMBTC4.00E-13Uncharacterized protein {ECO:0000313|EMBL:ERN03515.1}
TAIRAT5G232702.00E-12sugar transporter 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002856305685631179-
Transcript Sequence

Network for GWHGAAEX010711

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00083.23Sugar_tr1483.10E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.920
SRR2545915Juvenile tuber10.580
SRP108465SRR5643513five period of Gastrodia elata16.000
SRR5643514five period of Gastrodia elata16.700
SRR5643515five period of Gastrodia elata15.720
SRR5643524five period of Gastrodia elata19.820
SRR5643525five period of Gastrodia elata13.000
SRR5643528five period of Gastrodia elata8.040
SRR5643658five period of Gastrodia elata10.880
SRR5643659five period of Gastrodia elata18.180
SRR5643660five period of Gastrodia elata24.160
SRR5643661five period of Gastrodia elata24.780
SRR5643662five period of Gastrodia elata28.980
SRR5643663five period of Gastrodia elata24.930
SRR5643664five period of Gastrodia elata28.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.830
SRR6049655Rhizomagastrodiae_C368-T10_good_119.050
SRR6049656Rhizomagastrodiae_C368-T07_good_122.370
SRR6049657Rhizomagastrodiae_C368-T07_good_123.670
SRR6049658Rhizomagastrodiae_C368-T04_good_126.680
SRR6049659Rhizomagastrodiae_C368-T04_good_124.570
SRR6049660Rhizomagastrodiae_C368-T01_good_123.300
SRR6049661Rhizomagastrodiae_C368-T04_good_126.090
SRR6049662Rhizomagastrodiae_C368-T01_good_117.480
SRR6049663Rhizomagastrodiae_C368-T01_good_123.000
SRR6049664Rhizomagastrodiae_C368-T10_good_114.330
SRR6049665Rhizomagastrodiae_C368-T10_good_114.330
SRP279888GastroGastrodia elata tuber 24.72
JuvenJuvenile tuber20.44
Mother_GastroMother tuber of Gastrodia elata 24.36
Mother_JuvenMother tuber of Juvenile 16.20