Detail information of GWHGAAEX010713/evm.TU.scaffold_31.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430747636|ref|YP_007206765.1|5.00E-63methyltransferase family protein [Singulisphaera acidiphila DSM 18658]
KOGKOG12690SAM-dependent methyltransferases
nrgi|743757253|ref|XP_010921161.1|0PREDICTED: phosphoethanolamine N-methyltransferase 1-like [Elaeis guineensis]
Swissprottr|Q9FR44|PEAM1_ARATH0Phosphoethanolamine N-methyltransferase 1
trEMBLtr|M0U526|M0U526_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP00140_001}
TAIRAT1G736000S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002857440145756850+
Transcript Sequence

Network for GWHGAAEX010713

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08241.11Methyltransf_11591571.30E-12
PF13489.5Methyltransf_232744273.60E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05929E2.1.1.103, NMT Glycerophospholipid metabolism map00564

Gene Ontology

GO term OntologyName
GO:0006656Biological Processphosphatidylcholine biosynthetic process
GO:0000234Molecular Functionphosphoethanolamine N-methyltransferase activity
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.700
SRR2545915Juvenile tuber16.520
SRP108465SRR5643513five period of Gastrodia elata20.890
SRR5643514five period of Gastrodia elata30.920
SRR5643515five period of Gastrodia elata18.400
SRR5643524five period of Gastrodia elata23.590
SRR5643525five period of Gastrodia elata16.660
SRR5643528five period of Gastrodia elata18.590
SRR5643658five period of Gastrodia elata15.990
SRR5643659five period of Gastrodia elata14.870
SRR5643660five period of Gastrodia elata11.800
SRR5643661five period of Gastrodia elata11.540
SRR5643662five period of Gastrodia elata14.670
SRR5643663five period of Gastrodia elata10.330
SRR5643664five period of Gastrodia elata9.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.330
SRR6049655Rhizomagastrodiae_C368-T10_good_125.310
SRR6049656Rhizomagastrodiae_C368-T07_good_120.000
SRR6049657Rhizomagastrodiae_C368-T07_good_111.080
SRR6049658Rhizomagastrodiae_C368-T04_good_110.980
SRR6049659Rhizomagastrodiae_C368-T04_good_18.380
SRR6049660Rhizomagastrodiae_C368-T01_good_111.170
SRR6049661Rhizomagastrodiae_C368-T04_good_117.480
SRR6049662Rhizomagastrodiae_C368-T01_good_140.080
SRR6049663Rhizomagastrodiae_C368-T01_good_125.520
SRR6049664Rhizomagastrodiae_C368-T10_good_130.330
SRR6049665Rhizomagastrodiae_C368-T10_good_130.330
SRP279888GastroGastrodia elata tuber 10.14
JuvenJuvenile tuber35.34
Mother_GastroMother tuber of Gastrodia elata 26.65
Mother_JuvenMother tuber of Juvenile 30.51