Detail information of GWHGAAEX010715/evm.TU.scaffold_31.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672138128|ref|XP_008792810.1|7.47E-42PREDICTED: ocs element-binding factor 1-like [Phoenix dactylifera]
Swissprottr|P24068|OCS1_MAIZE4.00E-21Ocs element-binding factor 1
trEMBLtr|M0S5P5|M0S5P5_MUSAM1.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P06540_001}
TAIRAT1G753902.00E-29basic leucine-zipper 44

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002859082105909388-
Transcript Sequence

Network for GWHGAAEX010715

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_125681.60E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms117.570
SRR2545915Juvenile tuber127.590
SRP108465SRR5643513five period of Gastrodia elata77.080
SRR5643514five period of Gastrodia elata168.930
SRR5643515five period of Gastrodia elata64.870
SRR5643524five period of Gastrodia elata106.020
SRR5643525five period of Gastrodia elata117.080
SRR5643528five period of Gastrodia elata99.090
SRR5643658five period of Gastrodia elata141.690
SRR5643659five period of Gastrodia elata26.300
SRR5643660five period of Gastrodia elata24.770
SRR5643661five period of Gastrodia elata21.880
SRR5643662five period of Gastrodia elata39.220
SRR5643663five period of Gastrodia elata53.970
SRR5643664five period of Gastrodia elata32.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.050
SRR6049655Rhizomagastrodiae_C368-T10_good_150.400
SRR6049656Rhizomagastrodiae_C368-T07_good_164.360
SRR6049657Rhizomagastrodiae_C368-T07_good_135.130
SRR6049658Rhizomagastrodiae_C368-T04_good_146.120
SRR6049659Rhizomagastrodiae_C368-T04_good_125.910
SRR6049660Rhizomagastrodiae_C368-T01_good_146.780
SRR6049661Rhizomagastrodiae_C368-T04_good_139.900
SRR6049662Rhizomagastrodiae_C368-T01_good_177.890
SRR6049663Rhizomagastrodiae_C368-T01_good_155.510
SRR6049664Rhizomagastrodiae_C368-T10_good_170.410
SRR6049665Rhizomagastrodiae_C368-T10_good_170.410
SRP279888GastroGastrodia elata tuber 78.02
JuvenJuvenile tuber106.63
Mother_GastroMother tuber of Gastrodia elata 90.58
Mother_JuvenMother tuber of Juvenile 27.32