Detail information of GWHGAAEX010741/evm.TU.scaffold_32.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01672.00E-99FOG: Armadillo/beta-catenin-like repeats
nrgi|743813138|ref|XP_010929628.1|2.40E-136PREDICTED: uncharacterized protein LOC105051052 [Elaeis guineensis]
trEMBLtr|M0RJC3|M0RJC3_MUSAM3.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P18480_001}
TAIRAT5G509002.00E-99ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000032234354236365+
Transcript Sequence

Network for GWHGAAEX010741

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.260
SRR2545915Juvenile tuber8.780
SRP108465SRR5643513five period of Gastrodia elata17.370
SRR5643514five period of Gastrodia elata20.900
SRR5643515five period of Gastrodia elata18.680
SRR5643524five period of Gastrodia elata18.590
SRR5643525five period of Gastrodia elata18.720
SRR5643528five period of Gastrodia elata17.080
SRR5643658five period of Gastrodia elata10.990
SRR5643659five period of Gastrodia elata38.060
SRR5643660five period of Gastrodia elata44.420
SRR5643661five period of Gastrodia elata44.140
SRR5643662five period of Gastrodia elata41.830
SRR5643663five period of Gastrodia elata38.900
SRR5643664five period of Gastrodia elata58.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.610
SRR6049655Rhizomagastrodiae_C368-T10_good_120.510
SRR6049656Rhizomagastrodiae_C368-T07_good_125.840
SRR6049657Rhizomagastrodiae_C368-T07_good_131.840
SRR6049658Rhizomagastrodiae_C368-T04_good_126.380
SRR6049659Rhizomagastrodiae_C368-T04_good_128.800
SRR6049660Rhizomagastrodiae_C368-T01_good_125.270
SRR6049661Rhizomagastrodiae_C368-T04_good_125.560
SRR6049662Rhizomagastrodiae_C368-T01_good_121.150
SRR6049663Rhizomagastrodiae_C368-T01_good_118.880
SRR6049664Rhizomagastrodiae_C368-T10_good_120.080
SRR6049665Rhizomagastrodiae_C368-T10_good_120.080
SRP279888GastroGastrodia elata tuber 52.29
JuvenJuvenile tuber33.27
Mother_GastroMother tuber of Gastrodia elata 38.99
Mother_JuvenMother tuber of Juvenile 23.61