Gene detail

Detail information of GWHGAAEX010762/evm.TU.scaffold_32.43

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|237808049\|ref\|YP_002892489.1\|	1.00E-118	pyruvate kinase [Tolumonas auensis DSM 9187]
KOG	KOG2323	0	Pyruvate kinase
nr	gi\|672121102\|ref\|XP_008783844.1\|	0	PREDICTED: plastidial pyruvate kinase 4, chloroplastic-like [Phoenix dactylifera]
Swissprot	tr\|Q9M3B6\|PKP4_ARATH	0	Plastidial pyruvate kinase 4, chloroplastic (Precursor)
trEMBL	tr\|F6H6F4\|F6H6F4_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB47756.1}
TAIR	AT3G49160	0	pyruvate kinase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000032	1222543	1224953	-

Transcript Sequence
>GWHTAAEX010762 ATGAGCTCCTTGAAACTACAAGGAGAGTGGTTTTCATCATATAGATTTCAACTAACTGCAAATAAGCAGCTTTCCAGTCAAGTGCAGCTTTCAATTAAATCAATAAGAAAATATCCTGTATTACTTGCCAACTTACAAGGGGAAGACGATCATGAATGCAATAGTTGGAAAATCTATGCATTCTATGATACCCTAAATGCAATTAGTCGAACCTTGGCAATAAATTCTGATGAAGGAATTGCTTCCACTAAACCTAATAAATCAAACAGTGGTTCCTTAAAAATTTCCAATCTCGAGCCTTCTCATGTGCACATTCCTGAAATCTCAACTAGTAATATTGTCAGTCTTCTTGAAAAGCTGAAAGCCGTGCACCTGCATTTATTAGCTGCAGAACATTGGAACTCTTCTCATCTCAAGTTATGTCACAGACATTACTTGGCAAGTGCTACCAACTTGACTCATTATTTGGCCATAAAATGTCTTCACCTCCAGCAGCTTCAAGAAGATCTCTCTTCTGCTGGCCTTCTAAATCTGGAATGTATAAAGGCTCATGTTCTTGGAAGCATTTGTGCCAGCATTCAGCTGCTACATCACTTCTCCTCTAATGCTCTTGATAATAGTGATTCTGCAACCTATTTGGATAGGAATGGCTATAGTTCTTCCTACAAGGGTGAAAATGCAGCAAACTTCACCATCAGTACAATGAAGAAAAGATTGTCGGTTTATTCTGCTGCATTATTTGGTGAATGCTTAGGGAAGAGAACTGGACAAATCATGGTTACTGTTGGAAGAGAGGCTGTAAGAAATGAAATGCTTATGAATAATCTTCTCAAAAATGGGGCAAATGTGATACGTATCAACTGTGCACATGATGACCATACTGTGTGGGATGAGATCATTAAGACTGTGAAACACTGCTCACAGCTGCTGGAAAAGCCGTGCCGTGTTCTCATGGACCTGGCGGGGCCAAAGCTCAGAACAGGCTTAGTGAAAATGCATTCCAATATGGTAAAGCTGTCCCCAAGGAAGGATTCTCATGGTAGTATACTCTTCCCTGCCCGAATTTGGCTGTGCATCGAAGGCAGTGATCCTCCTGCCAGGCTTTCTACAGATGCTGTTGTCTGGTTGCCGAAGAGATTCTTCAGCAAGCTCAAAATCGGCGATCACGTGAATTTCATTGATGCTAAATGCAGAAAACGGCTGCTAAAAGTACTGAAGAGGCCTGCTTCTTCTGCTGATCAGGGTTACATAGCAGAGTGCCTGCAAACTTCATACATCAAAATGCACACACAATTCTCATTGAAGAGAAAAAAGACTGAATTTTTTGGGAGGGCGGTAAAGGTTCTAGCTAATGAACAATTTATCAGACTCAAAGTCGGAGACATGATTACTATCCTCAGAGCCTATTCCTCTTATCTTGATGAGCTGGGCAGCGCTGCACTGGGATCGGCGACGATAACATGCACTTCTGATCATTTTTTTGAATCCATCAAACTAGGCGAACCTGTCATCTTCGACAATGGAAAAATTTCGGGGAAGGTATGTGAAACAAATGCTGATCGGACGGTTGTGGTGGTAACTCGTGCCCGTCCCAAGGGCTCTAAGCTTGGCTTAGGAAAATCCATCAACATTCCTGAGAGCAAGGTGCAACTTAAAGGCCTGACCCCGAAAGATATTGCAGACCTTGACTTTATTGGTGCGAATGCTGATATGATAGGCATTTCCTTCATTCGGGATGTTCATGATGTAATTATTGTTCAGCATGAGTTGGAGAAGAGAAATCTTTCAGAATTGGGGATTATACTGAAGATCGAAACCAAGAGCGGTGTACAGAGACTGCCTTCATTGTTGTTTCAGGCAATGCAGGCCTCAAATCCTCTTGGGGTTATGATAGCTAGAGGAGATCTCATGGTGGAATGTGGATGGAAACAGATGGGTGACATTCAGGTGGAGATCGCGTCCATCTGCGGTGCCGCCCACATCCCAGTTATTTGGGCTACTCAGGTCCTTGAATCCCTTGTCAAATCTGGCTTCCCAACCAGAGCTGAAATCACTGATGTCTTCAAAGCAATGGAGTGGGCAAGCTGCATTATGTTGAATAAGGGTGACAACATTGTACAAGCTGTTGCAGCTTTAAATTCACTTCTAGGTGATAATAGATCCAATACTGAACAATGTTTTTTAAATGAGACCAATCACTGA

Network for GWHGAAEX010762

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00224.20	PK	254	338	5.60E-11
PF00224.20	PK	483	700	3.60E-39

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00873	PK, pyk	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Pyruvate metabolism	map00620
		Purine metabolism	map00230
		Glucagon signaling pathway	map04922

Gene Ontology

GO term	Ontology	Name
GO:0006096	Biological Process	glycolytic process
GO:0003824	Molecular Function	catalytic activity
GO:0030955	Molecular Function	potassium ion binding
GO:0000287	Molecular Function	magnesium ion binding
GO:0004743	Molecular Function	pyruvate kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.240
SRP064423	SRR2545915	Juvenile tuber	1.510
SRP108465	SRR5643513	five period of Gastrodia elata	0.600
	SRR5643514	five period of Gastrodia elata	1.500
	SRR5643515	five period of Gastrodia elata	2.840
	SRR5643524	five period of Gastrodia elata	2.000
	SRR5643525	five period of Gastrodia elata	0.270
	SRR5643528	five period of Gastrodia elata	0.390
	SRR5643658	five period of Gastrodia elata	0.380
	SRR5643659	five period of Gastrodia elata	4.430
	SRR5643660	five period of Gastrodia elata	3.060
	SRR5643661	five period of Gastrodia elata	2.630
	SRR5643662	five period of Gastrodia elata	0.850
	SRR5643663	five period of Gastrodia elata	1.930
	SRR5643664	five period of Gastrodia elata	1.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.780
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.840
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.530
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.850
SRP279888	Gastro	Gastrodia elata tuber	0.11
	Juven	Juvenile tuber	0.04
	Mother_Gastro	Mother tuber of Gastrodia elata	0.03
	Mother_Juven	Mother tuber of Juvenile	0.02