Detail information of GWHGAAEX010764/evm.TU.scaffold_32.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743796884|ref|XP_010924840.1|2.39E-86PREDICTED: probable WRKY transcription factor 53 [Elaeis guineensis]
Swissprottr|Q9SUP6|WRK53_ARATH1.00E-37Probable WRKY transcription factor 53
trEMBLtr|M0THF1|M0THF1_MUSAM2.00E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P14140_001}
TAIRAT4G238104.00E-37WRKY family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003212388781240985+
Transcript Sequence

Network for GWHGAAEX010764

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1301893.20E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms150.450
SRR2545915Juvenile tuber137.050
SRP108465SRR5643513five period of Gastrodia elata23.660
SRR5643514five period of Gastrodia elata9.230
SRR5643515five period of Gastrodia elata106.610
SRR5643524five period of Gastrodia elata13.750
SRR5643525five period of Gastrodia elata93.590
SRR5643528five period of Gastrodia elata156.260
SRR5643658five period of Gastrodia elata47.190
SRR5643659five period of Gastrodia elata127.710
SRR5643660five period of Gastrodia elata43.340
SRR5643661five period of Gastrodia elata123.420
SRR5643662five period of Gastrodia elata128.160
SRR5643663five period of Gastrodia elata95.990
SRR5643664five period of Gastrodia elata197.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1166.680
SRR6049655Rhizomagastrodiae_C368-T10_good_194.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1103.460
SRR6049657Rhizomagastrodiae_C368-T07_good_1119.210
SRR6049658Rhizomagastrodiae_C368-T04_good_190.450
SRR6049659Rhizomagastrodiae_C368-T04_good_1122.000
SRR6049660Rhizomagastrodiae_C368-T01_good_1291.950
SRR6049661Rhizomagastrodiae_C368-T04_good_1110.940
SRR6049662Rhizomagastrodiae_C368-T01_good_169.650
SRR6049663Rhizomagastrodiae_C368-T01_good_1219.250
SRR6049664Rhizomagastrodiae_C368-T10_good_170.260
SRR6049665Rhizomagastrodiae_C368-T10_good_170.260
SRP279888GastroGastrodia elata tuber 38.84
JuvenJuvenile tuber2.53
Mother_GastroMother tuber of Gastrodia elata 192.33
Mother_JuvenMother tuber of Juvenile 135.11