Gene detail

Detail information of GWHGAAEX010768/evm.TU.scaffold_32.53

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|479128682\|ref\|YP_005068642.1\|	2.00E-62	hypothetical protein [Arthrospira platensis NIES-39]
nr	gi\|720031148\|ref\|XP_010265723.1\|	0	PREDICTED: probable folate-biopterin transporter 6 [Nelumbo nucifera]
Swissprot	tr\|Q9LEV7\|FBT6_ARATH	0	Probable folate-biopterin transporter 6
trEMBL	tr\|A0A061GIF0\|A0A061GIF0_THECC	0	Major facilitator superfamily protein {ECO:0000313\|EMBL:EOY29316.1}
TAIR	AT5G10820	0	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000032	1450887	1475108	+

Transcript Sequence
>GWHTAAEX010768 AATTAAGAAGAGGCGTGAAAGAAAATGCTCTTTGATGAACCAATAGCAAAAGCCCCAGATACGCTGGAAAAGAAAAACGAAGAAAGAAGGAAAGATCCAAAGGAAAGAGGCGGAAGGAGATAGAGCAGCAGTAACCATGGCCTCCTCAAGGGTTGGGCCAGTGCTTTCAAGTAAAGAGGAGTTCTCCATCCGTTGATATCCAAAATCAGCATGCGAAGAGATGGTCTCGCTGGAATCCCAAAATCTGATTGATGAGCCGTGCGCGAAAGATTCAGCTCCCATCGCTGCCGGCCGCCTTGCCCTTCTCCGGCAGCCGTTGGAATGGATCGGAATGCTTTGCAGAGACCTGAACGCGAGCTTCGTGCTCGGCGTGGTGCTCGTGTATGGTCTAAGCCAAGGCTTCGCAGGGTCTTACTTCAGAGTTGTCTCAGATTTCTACTGGAAGGATGTTCAGAAGGTGCAGCCATCCGCGGTGCAGATGTACGTAGGCTTCTACTACATCCCCTGGATCATGAAGCCCCTTTGGGGGATCCTCACCGACACCTTCCCTGTCCGCGGATACCGCCGCCGCCCCTACTTTATCCTTGCAGGTGTTCTGGGCACATTTACCGCATTGATCATATCCGTACATGGAAAACTGGCGATTCCGGTGGCCATACTCTGCTTGGTGGGGATGGCTGCCGGAGTGGCCATTGCAGATGTGACAATTGATGCCTGCATTGCCAGGAAGAGCATTGAGCATCCGAGGCTGGCGCCGGATATGCAGAGCCTCTGCAGCTTCGTTTCTTCTGTTGGCGCATTGATTGGGTACTCTTCCAGCGGCGTCCTCGTGCATCTTCTGGGCGCACAGGGAGCCTTTGTACTCATGGCAATTCCGCCTGCATCTCTTGTTGTTTTGGGCTTTATTATCTTTGAAATGAAGACCAATCGCCCCAAAGAGAAGAGGGAGGTGAAAGAGAAGGTGCGAGAGACAATATTTGGCATGGGAAGGACAATAAAATGTCCTGAGGTGTGGAAGCCATCATTATTCATGTTCCTCTCAGTAGCCCTCAGTCTTAGCACATATGAAGGCCAGTTCTATTGGTTCACGGACCCAAAGGCTGGACCGGCTTTCTCACAGGGATTTGTCGGCATGATTTACGCTATAGGCGCAGTTGCTTCCATTGTTGGCGTCCTGATTTATCACAAACTCCTGAAAGGCTATCCATTCCGGAGTTTGATTTTCTGTGCTCAGCTCCTCTATGGTGCATCTGGAATGCTGGATCTCATCTTTATACTGCGATGGAACCTCAAACTCAGGATACCAGATTACATCTTTGTTGTCCTAGATGAATGCATCAGCCTGGTTGTGAGCCGTATTCGCTGGATGCCGATGATCATCCTGAGCACAAGACTCTGCCCCTTAGGAATTGAAGGCACCTTTTTTGCTCTTCTCATGTGCATCGACACTGTGGGCTCCCTTGTATCGAAAACCGGAGGAGGGGTTCTATTGCGCCTTTTCCATGTAACCAGAACTGATTTCGACAATCTTTGGCTTGCTGTGCTTATAAGGAACTCACTGAGGTTACTAACACTGGCTCTTGTTTTTCTGGTGCCTGATGCTGGCCAATTAGATGCATTGCTTCCTTCAAAACTGATGAGAGGAAGTGAAAGTGATGCTGAAGGCCAGCTGAAGCTTGTTCCTATTAAGAACGTAGATGAAGCAGTAGCAACCGTCCCTTAA

Network for GWHGAAEX010768

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03092.15	BT1	59	240	4.90E-41
PF03092.15	BT1	265	465	2.50E-49

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.410
SRP064423	SRR2545915	Juvenile tuber	9.200
SRP108465	SRR5643513	five period of Gastrodia elata	16.660
	SRR5643514	five period of Gastrodia elata	15.850
	SRR5643515	five period of Gastrodia elata	18.140
	SRR5643524	five period of Gastrodia elata	18.860
	SRR5643525	five period of Gastrodia elata	33.480
	SRR5643528	five period of Gastrodia elata	37.710
	SRR5643658	five period of Gastrodia elata	31.290
	SRR5643659	five period of Gastrodia elata	19.250
	SRR5643660	five period of Gastrodia elata	19.990
	SRR5643661	five period of Gastrodia elata	18.120
	SRR5643662	five period of Gastrodia elata	16.390
	SRR5643663	five period of Gastrodia elata	17.370
	SRR5643664	five period of Gastrodia elata	19.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	28.520
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	28.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.980
SRP279888	Gastro	Gastrodia elata tuber	21.63
	Juven	Juvenile tuber	17.07
	Mother_Gastro	Mother tuber of Gastrodia elata	32.75
	Mother_Juven	Mother tuber of Juvenile	22.37