Detail information of GWHGAAEX010770/evm.TU.scaffold_32.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|592748063|gb|AHL44126.1|9.06E-66EREB1 [Dendrobium catenatum]
Swissprottr|O80339|ERF82_ARATH4.00E-34Ethylene-responsive transcription factor 3
trEMBLtr|W8Q904|W8Q904_9ASPA3.00E-66EREB1 {ECO:0000313|EMBL:AHL44126.1}
TAIRAT1G506401.00E-33ethylene responsive element binding factor 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003215316661532675-
Transcript Sequence

Network for GWHGAAEX010770

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP226751.80E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.820
SRR2545915Juvenile tuber27.550
SRP108465SRR5643513five period of Gastrodia elata93.620
SRR5643514five period of Gastrodia elata83.750
SRR5643515five period of Gastrodia elata91.280
SRR5643524five period of Gastrodia elata77.960
SRR5643525five period of Gastrodia elata136.140
SRR5643528five period of Gastrodia elata101.130
SRR5643658five period of Gastrodia elata146.890
SRR5643659five period of Gastrodia elata74.020
SRR5643660five period of Gastrodia elata72.040
SRR5643661five period of Gastrodia elata92.150
SRR5643662five period of Gastrodia elata108.990
SRR5643663five period of Gastrodia elata81.030
SRR5643664five period of Gastrodia elata68.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_189.790
SRR6049655Rhizomagastrodiae_C368-T10_good_186.740
SRR6049656Rhizomagastrodiae_C368-T07_good_181.670
SRR6049657Rhizomagastrodiae_C368-T07_good_182.300
SRR6049658Rhizomagastrodiae_C368-T04_good_169.830
SRR6049659Rhizomagastrodiae_C368-T04_good_170.320
SRR6049660Rhizomagastrodiae_C368-T01_good_169.560
SRR6049661Rhizomagastrodiae_C368-T04_good_177.630
SRR6049662Rhizomagastrodiae_C368-T01_good_181.310
SRR6049663Rhizomagastrodiae_C368-T01_good_160.750
SRR6049664Rhizomagastrodiae_C368-T10_good_192.150
SRR6049665Rhizomagastrodiae_C368-T10_good_192.150
SRP279888GastroGastrodia elata tuber 55.06
JuvenJuvenile tuber66.89
Mother_GastroMother tuber of Gastrodia elata 107.97
Mother_JuvenMother tuber of Juvenile 62.21