Detail information of GWHGAAEX010771/evm.TU.scaffold_32.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427733823|ref|YP_007053367.1|4.00E-20PEP-CTERM putative exosortase interaction domain-containing protein [Rivularia sp. PCC 7116]
nrgi|672111191|ref|XP_008799468.1|8.15E-159PREDICTED: GDSL esterase/lipase At2g04570-like [Phoenix dactylifera]
Swissprottr|Q9SJB4|GDL34_ARATH1.00E-147GDSL esterase/lipase At2g04570 (Precursor)
trEMBLtr|A0A059DE95|A0A059DE95_EUCGR6.00E-153Uncharacterized protein {ECO:0000313|EMBL:KCW88731.1}
TAIRAT2G045703.00E-147GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003215558231580748+
Transcript Sequence

Network for GWHGAAEX010771

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00657.21Lipase_GDSL303437.30E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.150
SRR2545915Juvenile tuber27.170
SRP108465SRR5643513five period of Gastrodia elata13.560
SRR5643514five period of Gastrodia elata10.590
SRR5643515five period of Gastrodia elata9.590
SRR5643524five period of Gastrodia elata7.400
SRR5643525five period of Gastrodia elata13.690
SRR5643528five period of Gastrodia elata6.770
SRR5643658five period of Gastrodia elata8.540
SRR5643659five period of Gastrodia elata10.860
SRR5643660five period of Gastrodia elata16.320
SRR5643661five period of Gastrodia elata15.990
SRR5643662five period of Gastrodia elata18.150
SRR5643663five period of Gastrodia elata12.660
SRR5643664five period of Gastrodia elata23.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.820
SRR6049655Rhizomagastrodiae_C368-T10_good_135.100
SRR6049656Rhizomagastrodiae_C368-T07_good_130.340
SRR6049657Rhizomagastrodiae_C368-T07_good_126.500
SRR6049658Rhizomagastrodiae_C368-T04_good_126.610
SRR6049659Rhizomagastrodiae_C368-T04_good_122.830
SRR6049660Rhizomagastrodiae_C368-T01_good_124.090
SRR6049661Rhizomagastrodiae_C368-T04_good_126.930
SRR6049662Rhizomagastrodiae_C368-T01_good_118.290
SRR6049663Rhizomagastrodiae_C368-T01_good_119.270
SRR6049664Rhizomagastrodiae_C368-T10_good_120.110
SRR6049665Rhizomagastrodiae_C368-T10_good_120.110
SRP279888GastroGastrodia elata tuber 28.09
JuvenJuvenile tuber12.94
Mother_GastroMother tuber of Gastrodia elata 6.15
Mother_JuvenMother tuber of Juvenile 5.28