Gene detail

Detail information of GWHGAAEX010783/evm.TU.scaffold_32.74

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2692	Sialyltransferase
nr	gi\|743775086\|ref\|XP_010917917.1\|	PREDICTED: uncharacterized protein LOC105042418 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0TL69\|M0TL69_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P27330_001}
TAIR	AT1G08660	MALE GAMETOPHYTE DEFECTIVE 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000032	2423767	2434936	+

Transcript Sequence
>GWHTAAEX010783 GTTCGAAAATTCCATTCCCATCAACGATATTCAATATTGGAGTTAATGGTTTTGAGAGATCTATCTCAACACATATGCGAGCATATCAAAGTTATGCGTGGGCCGATCAATTAAAAGCGGTTTACCCAATTGCTAGGCAATTCTGGTGAGGTTGATCAGCCCCCATAGGCTAATTGGTAGTTCGTGAAGCTGAATCCATAGAGGGGTGGAGAAACCCACCTGCATAGGAGTGAAGCCTTGGACCAATTTAGCTAATCCCAAAGCTTGGCCTCCTAAGAACCAAGATCCACTTGTGAGGACTTGGTTGACCGCATCAGATTCTGCAAAATTTACAAGGAGACAATCCGACTTAAGCAGATGAATGGTGAAGCTCCCAAACCTTCCCCAACGAATAAGCAACTCATTCTCAGACACCGAGTAGGGGATGCGGCTACCGAATGAACGGATAACAATCAATGAACTATCAAATTTGTTATTGATCAATTTTTGTTCCACCCGTTCCATTAGGCAACTACCATCAGCACCAGTAAACGACTCAGTGTTGCCCACAACCGGGCAAGTATAGGTTTTCCGCTGAACCCACGCTTTTTTTTTATGCTGTGAGCTTGTTGGGGCATTTACCCGAGCAGGTGACATGCAAGAACCAGATTTTTCTACAAGGACTTATCTTGTGTAGAGGAGCTATTAACTTGCAACCCCTCTGCTAATTCATTCACAGGCTTAACAATATCACCATAAGTATCATAGAATCAGAACAAACAGAATACGACCTCGTTCAGATTTTTTTTTTTTTTTTATGCGGACAAGTCTGTAGCTGCCCATGCAGAAACTGCCCTAGCTCCCATGAATTTCAGCAGGCCACCTCCAAATTTGGCGATTTCAGTTGGTGGTGAGTGGGAACAAGTTTTTGGAAGGCCAATTATAGTCTCCAAACCATCATCCGCCGGTACGCTCGAGCCAGCTTTCGTTGGCGAATGCAGGTGAGATCCCGCAGCCTTTGTGGGGTCGAGGACAGTTCTCAAGGGCGATCTCACCGAGGGAACCGTCTCGGTCTCAGCTGCCAAGGCTAGTGCCAAGCCTTCAACCATTTTACCCGACGCCTAACCAGAAGGAACAGCCTCAGTGTCGACCGCCTTAGCCACCAGATACGTGAGCTGTTCCACCGCAGTTCCACTCGACAAGCCCGATACATCCGACGCGGCCACTGTAGATCCAATCGACGCAAACGTCCGAGAGGGTCCCTGGACGGACCCGTTGTCGGCCCAGATTCAGCCAGCCGTCCGTGCAAAGAAGAGGCCGGCGCTTTAGCCAAGGCAACGGCTCTAGCCAGGGCAGCCGCCGAACCCCGCCATTGGATTGAGGGGTTCACGATCACCAGCCGTCAGCGCCTTAGGACAAGAAGGTGGGAGCTCCTCCTTTTCTCCTCATCAAAGTCTTTGGGAGCTCCTCCTTTTTCGATGCGCAGCCGCAAGTGAGATCCAAACTGCAACTAAAAAGTCTTGAAGAAGAGAGATGAGAGGGCCCAAAAGTTCGGCTGCGAGCCCACGACTGACTGTCATTCTTCTCCTCGGCATGACCTTCGCCTTTACCGTACTTGTCATATACTTACAGTCTTATTACTTCTTCACAGGAAAGCAGAAATTTGACACAAATACTGAGGATACCAGCATACTCTCAGATTTTCAGTCACGGGTTCAGCATTGCGTGGCAAACAAAGGACTTGGCCTCACTGCTCATATTATTGATCATTGCCGATTAGTCCTCAAATTTCCTGAAGGCACCAACAGCACCTGGTATAATGCACAATTTAAAATTTTTGAGCCCTTAGAGTACCATTATGATGTATGTGAAGCTATTTTATTGTGGGAACAGTACCGTAATATGACTACCATCTTGACGAGGGAGTATCTAGATGTGCGACCAGATGGTTGGCTGGAATATGCTGCTAAAAGAATTGCACAATTGGGTGCAGATAAATGCTACAATCGCTCTCTTTGTGAGGAACATCTTAATTTGATTTTACCATCAGGACCTCCCTTTCATCCGCGACAATTCAGAACATGCGCTGTTGTTGGAAATTCAGGGGATCTCTTGAAGACTGAATTTGGGAAAGAAATTGATGAACATGATGCTGTTTTTAGGGATAATGAAGCTCCAGTTAATGAGAAATATGCTAGACATGTTGGTCTGAAAAGGAACTTCCGTCTTGTAGTAAGAGGAGCTGCTCGAAACATGGCTGTCATTTTAAATGGATCTTCTGATGAGGTGCTTATAATTAAAAGTGTAACGCATAGAGATTTCAACACTGTGATAGAGAGTCTTCCCAATCCAGTCTATCTTTTCCAAGGGATTGTGCTACGCAGGGGTGCTAAAGGAACCGGAATGAAATCTATTGAGTTTGCACTATCCATGTGTGATGTAGTGGACATATACGGCTTCACTGTGGATCCCGGCTACACAGAATGGACGCGCTACTTCTCATCTCCAAGGAAAGGGCATAATCCGTTGCAGGGAAGGGCATATTATCAACTGCTGGAATGCCTTGGTGTTATAAGAATTCATTCTCCTATGAGAGCGGAGAGGAAGCAAGATTGGTCTGATGTCCCAAGCAAGGAGGAGATAAGGCTTGCTCATGGTGCAGCCCTTCGGCTGAGGAAGGGTGATTTAGGACAGCCTCAGGACTTGGGGCCCTTCACAAACTGCAGAGTTTGGGGCACTGTAAGCCGAAATAGTACTGCCAGGATGATGATCTCAGGATCTGGACACATGAGTGATCAGAGGAAGAGCTCTAATTACAGCAAATGGGAGCTTCTGCCATTTGAGACACTTAGAAGGGAGGCCCAGGAGCATTACTCTCTCATGGGCCGTGCGTCCCTGTACAAGTTGGATGGCAACAAATTGGACGATCTTGTCTGCGTTAAACATCATTGATTTTGTCAGTGTGATCGATGTATTATAGCTCTTTACTCTTCATCAAAAAGAATTTGATGTAACTTTAGTGTTTTTAAACATCAGTCCCGAAAAGGATCTGACACGACATGACATGTGCGAACATTGGTTGCAAATTGATGGTATTTCTCACTAAATAGCCTCATTTTGATCCCAACCACTTAGACTACTGGGATTATCATTGACTCTTAATCGCC

Network for GWHGAAEX010783

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00777.17	Glyco_transf_29	154	239	6.10E-21

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT29

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006486	Biological Process	protein glycosylation
GO:0008373	Molecular Function	sialyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.260
SRP064423	SRR2545915	Juvenile tuber	14.750
SRP108465	SRR5643513	five period of Gastrodia elata	16.190
	SRR5643514	five period of Gastrodia elata	17.700
	SRR5643515	five period of Gastrodia elata	14.560
	SRR5643524	five period of Gastrodia elata	15.680
	SRR5643525	five period of Gastrodia elata	21.570
	SRR5643528	five period of Gastrodia elata	16.120
	SRR5643658	five period of Gastrodia elata	22.460
	SRR5643659	five period of Gastrodia elata	15.320
	SRR5643660	five period of Gastrodia elata	14.820
	SRR5643661	five period of Gastrodia elata	15.710
	SRR5643662	five period of Gastrodia elata	12.710
	SRR5643663	five period of Gastrodia elata	13.260
	SRR5643664	five period of Gastrodia elata	14.630
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.050
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.850
SRP279888	Gastro	Gastrodia elata tuber	11.17
	Juven	Juvenile tuber	11.09
	Mother_Gastro	Mother tuber of Gastrodia elata	11.75
	Mother_Juven	Mother tuber of Juvenile	9.25