Detail information of GWHGAAEX010785/evm.TU.scaffold_32.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG03965.00E-88Uncharacterized conserved protein
nrgi|565391379|ref|XP_006361400.1|1.32E-95PREDICTED: macrophage erythroblast attacher-like [Solanum tuberosum]
trEMBLtr|A0A068TVB9|A0A068TVB9_COFCA6.00E-95Coffea canephora
TAIRAT3G550705.00E-88LisH/CRA/RING-U-box domains-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003225846292592645+
Transcript Sequence

Network for GWHGAAEX010785

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10607.8CLTH1681.20E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.980
SRR2545915Juvenile tuber23.280
SRP108465SRR5643513five period of Gastrodia elata27.540
SRR5643514five period of Gastrodia elata25.500
SRR5643515five period of Gastrodia elata27.270
SRR5643524five period of Gastrodia elata23.750
SRR5643525five period of Gastrodia elata34.510
SRR5643528five period of Gastrodia elata36.060
SRR5643658five period of Gastrodia elata35.240
SRR5643659five period of Gastrodia elata24.230
SRR5643660five period of Gastrodia elata27.510
SRR5643661five period of Gastrodia elata28.900
SRR5643662five period of Gastrodia elata24.520
SRR5643663five period of Gastrodia elata24.160
SRR5643664five period of Gastrodia elata24.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.560
SRR6049655Rhizomagastrodiae_C368-T10_good_121.630
SRR6049656Rhizomagastrodiae_C368-T07_good_124.850
SRR6049657Rhizomagastrodiae_C368-T07_good_130.990
SRR6049658Rhizomagastrodiae_C368-T04_good_127.690
SRR6049659Rhizomagastrodiae_C368-T04_good_128.340
SRR6049660Rhizomagastrodiae_C368-T01_good_129.870
SRR6049661Rhizomagastrodiae_C368-T04_good_123.680
SRR6049662Rhizomagastrodiae_C368-T01_good_128.430
SRR6049663Rhizomagastrodiae_C368-T01_good_127.910
SRR6049664Rhizomagastrodiae_C368-T10_good_129.390
SRR6049665Rhizomagastrodiae_C368-T10_good_129.390
SRP279888GastroGastrodia elata tuber 31.13
JuvenJuvenile tuber22.96
Mother_GastroMother tuber of Gastrodia elata 53.08
Mother_JuvenMother tuber of Juvenile 33.07