Detail information of GWHGAAEX010786/evm.TU.scaffold_32.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743848473|ref|XP_010939368.1|0PREDICTED: F-box protein At1g10780-like [Elaeis guineensis]
Swissprottr|Q9SAC4|FB2_ARATH2.00E-158F-box protein At1g10780
trEMBLtr|C5X295|C5X295_SORBI0Putative uncharacterized protein Sb02g026460 {ECO:0000313|EMBL:EER96842.1}
TAIRAT1G107801.00E-157F-box/RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003226576702669185-
Transcript Sequence

Network for GWHGAAEX010786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.6F-box-like4461.40E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.980
SRR2545915Juvenile tuber11.470
SRP108465SRR5643513five period of Gastrodia elata11.170
SRR5643514five period of Gastrodia elata9.990
SRR5643515five period of Gastrodia elata12.040
SRR5643524five period of Gastrodia elata9.390
SRR5643525five period of Gastrodia elata7.850
SRR5643528five period of Gastrodia elata8.460
SRR5643658five period of Gastrodia elata7.740
SRR5643659five period of Gastrodia elata12.970
SRR5643660five period of Gastrodia elata13.930
SRR5643661five period of Gastrodia elata11.340
SRR5643662five period of Gastrodia elata14.560
SRR5643663five period of Gastrodia elata13.190
SRR5643664five period of Gastrodia elata11.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.210
SRR6049655Rhizomagastrodiae_C368-T10_good_16.920
SRR6049656Rhizomagastrodiae_C368-T07_good_111.110
SRR6049657Rhizomagastrodiae_C368-T07_good_19.230
SRR6049658Rhizomagastrodiae_C368-T04_good_111.240
SRR6049659Rhizomagastrodiae_C368-T04_good_19.910
SRR6049660Rhizomagastrodiae_C368-T01_good_111.960
SRR6049661Rhizomagastrodiae_C368-T04_good_110.650
SRR6049662Rhizomagastrodiae_C368-T01_good_17.980
SRR6049663Rhizomagastrodiae_C368-T01_good_111.960
SRR6049664Rhizomagastrodiae_C368-T10_good_111.830
SRR6049665Rhizomagastrodiae_C368-T10_good_111.830
SRP279888GastroGastrodia elata tuber 12.55
JuvenJuvenile tuber8.76
Mother_GastroMother tuber of Gastrodia elata 14.94
Mother_JuvenMother tuber of Juvenile 12.09