Detail information of GWHGAAEX010787/evm.TU.scaffold_32.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695009463|ref|XP_009391368.1|0PREDICTED: F-box protein At1g10780 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SAC4|FB2_ARATH3.00E-164F-box protein At1g10780
trEMBLtr|A0A096PT46|A0A096PT46_MAIZE0Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G005486_P01}
TAIRAT1G107801.00E-163F-box/RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003227693672780684-
Transcript Sequence

Network for GWHGAAEX010787

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.6F-box-like4443.40E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.320
SRR2545915Juvenile tuber10.940
SRP108465SRR5643513five period of Gastrodia elata10.140
SRR5643514five period of Gastrodia elata8.940
SRR5643515five period of Gastrodia elata9.700
SRR5643524five period of Gastrodia elata9.520
SRR5643525five period of Gastrodia elata17.080
SRR5643528five period of Gastrodia elata15.860
SRR5643658five period of Gastrodia elata18.610
SRR5643659five period of Gastrodia elata8.100
SRR5643660five period of Gastrodia elata8.310
SRR5643661five period of Gastrodia elata8.780
SRR5643662five period of Gastrodia elata9.660
SRR5643663five period of Gastrodia elata7.960
SRR5643664five period of Gastrodia elata8.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.550
SRR6049655Rhizomagastrodiae_C368-T10_good_16.730
SRR6049656Rhizomagastrodiae_C368-T07_good_111.050
SRR6049657Rhizomagastrodiae_C368-T07_good_111.290
SRR6049658Rhizomagastrodiae_C368-T04_good_112.440
SRR6049659Rhizomagastrodiae_C368-T04_good_112.510
SRR6049660Rhizomagastrodiae_C368-T01_good_112.060
SRR6049661Rhizomagastrodiae_C368-T04_good_113.360
SRR6049662Rhizomagastrodiae_C368-T01_good_111.370
SRR6049663Rhizomagastrodiae_C368-T01_good_111.130
SRR6049664Rhizomagastrodiae_C368-T10_good_110.210
SRR6049665Rhizomagastrodiae_C368-T10_good_110.210
SRP279888GastroGastrodia elata tuber 8.55
JuvenJuvenile tuber7.83
Mother_GastroMother tuber of Gastrodia elata 21.85
Mother_JuvenMother tuber of Juvenile 19.26