Detail information of GWHGAAEX010791/evm.TU.scaffold_32.87
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|269837945|ref|YP_003320173.1| | 1.00E-22 | dihydroneopterin aldolase [Sphaerobacter thermophilus DSM 20745] |
| nr | gi|115480667|ref|NP_001063927.1| | 1.17E-48 | Os09g0560500 [Oryza sativa Japonica Group] |
| Swissprot | tr|Q9SF23|FOLB1_ARATH | 2.00E-36 | Dihydroneopterin aldolase 1 {ECO:0000305} |
| trEMBL | tr|I1QR99|I1QR99_ORYGL | 1.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA09G0157800.1} |
| TAIR | AT3G11750 | 6.00E-36 | Dihydroneopterin aldolase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000032 | 3133963 | 3157196 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010791
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02152.17 | FolB | 29 | 120 | 7.40E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01633 | folB | Metabolic pathways | map01100 |
| Folate biosynthesis | map00790 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006760 | Biological Process | folic acid-containing compound metabolic process |
| GO:0004150 | Molecular Function | dihydroneopterin aldolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.620 |
| SRR2545915 | Juvenile tuber | 3.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.780 |
| SRR5643514 | five period of Gastrodia elata | 8.590 | |
| SRR5643515 | five period of Gastrodia elata | 9.050 | |
| SRR5643524 | five period of Gastrodia elata | 11.480 | |
| SRR5643525 | five period of Gastrodia elata | 3.960 | |
| SRR5643528 | five period of Gastrodia elata | 7.530 | |
| SRR5643658 | five period of Gastrodia elata | 8.990 | |
| SRR5643659 | five period of Gastrodia elata | 5.390 | |
| SRR5643660 | five period of Gastrodia elata | 6.260 | |
| SRR5643661 | five period of Gastrodia elata | 7.500 | |
| SRR5643662 | five period of Gastrodia elata | 5.830 | |
| SRR5643663 | five period of Gastrodia elata | 6.900 | |
| SRR5643664 | five period of Gastrodia elata | 4.500 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.330 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.370 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.050 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.190 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.280 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.380 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.540 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.770 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.11 |
| Juven | Juvenile tuber | 0.97 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.82 | |
| Mother_Juven | Mother tuber of Juvenile | 0.89 |